CDKN1A (cyclin-dependent kinase inhibitor 1A)
2001-04-01 Delphine Javelaud  , Françoise Besançon   AffiliationInstitut Curie, Pavillon Pasteur, Unité INSERM 365, 26 rue dUlm, 75231 Paris cedex 05, France
Identity
HGNC
LOCATION
6p21.2
IMAGE

LEGEND
CDKN1A (6p21) - Courtesy Mariano Rocchi, Resources for Molecular Cytogenetics.
LOCUSID
ALIAS
CAP20,CDKN1,CIP1,MDA-6,P21,SDI1,WAF1,p21CIP1
FUSION GENES
DNA/RNA
Description
3 exons (68, 450, 1600 pb ; the first exon is not translated)
Transcription
2,1 kb mRNA, expression regulated at both transcriptional and post-transcriptional levels.
Proteins

Description
164 amino acids, 18 kDa. Contains interacting domains with several proteins (see Figure) and a nuclear localization signal.
Expression
in all adult human tissues. CDKN1A expression in the developing mouse embryo is correlated with cell-cycle arrest that precedes terminal differentiation in a variety of tissues.
Localisation
nuclear and cytoplasmic.
located predominantly in the nucleus.
relocalization to the cytoplasm during the differentiation of immature monocytes.
Function
can interact with cytoplasmic proteins ( pro-caspase-3, ASK-1, JNK, CaM, cyclinD-CDK4).
CDKN1A is implicated in regulation of cell growth and cell response to DNA damage. It inhibits cell cycle progression in G1 by binding to G1 cyclin-CDK complexes and to PCNA antigen and may also induce G2 arrest. In response to DNA damage p53 induces CDKN1A expression, which is responsible for the cell cycle arrest at the G1 checkpoint. CDKN1A plays also a role in the protection of cells against apoptosis and its expression is essential to maintain cell survival during differentiation of several cell lineages.
Mutations
Somatic
Analysis of normal and tumor cells revealed two common variants in the CDKN1A gene which were not unique to tumors: a C to A substitution at codon 31 (Ser 31-to-Arg) which does not result in loss of activity and a C to T change in the 3 untranslated region of the CDKN1A gene, 20 bp following the stop codon. In prostate cancer, a single base insertion at codon 35, resulting in frameshift, protein troncation and impairement of activity, has been identified. A Phe to Leu change at codon 63, an Arg to Trp change at position 94 and an Asn to Ser change at position 50 were observed in a Burkitts lymphoma, a human breast carcinoma and a malignant melanoma cell line, respectively.
Implicated in
Article Bibliography
| Pubmed ID | Last Year | Title | Authors |
|---|---|---|---|
| 10064589 | 1999 | Apoptosis inhibitory activity of cytoplasmic p21(Cip1/WAF1) in monocytic differentiation. | Asada M et al |
| 8084608 | 1994 | A single nucleotide substitution at codon 31 (Ser/Arg) defines a polymorphism in a highly conserved region of the p53-inducible gene WAF1/CIP1. | Chedid M et al |
| 10967424 | 2000 | p21(WAF1/Cip1): more than a break to the cell cycle? | Dotto GP et al |
| 9925742 | 1999 | Transcriptional regulation of the p21((WAF1/CIP1)) gene. | Gartel AL et al |
| 8242751 | 1993 | The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinases. | Harper JW et al |
| 7655464 | 1995 | Two variants of the CIP1/WAF1 gene occur together and are associated with human cancer. | Mousses S et al |
| 7863329 | 1995 | p53-independent expression of p21Cip1 in muscle and other terminally differentiating cells. | Parker SB et al |
Other Information
Locus ID:
NCBI: 1026
MIM: 116899
HGNC: 1784
Ensembl: ENSG00000124762
Variants:
dbSNP: 1026
ClinVar: 1026
TCGA: ENSG00000124762
COSMIC: CDKN1A
RNA/Proteins
Expression (GTEx)
Pathways
Protein levels (Protein atlas)
PharmGKB
| Entity ID | Name | Type | Evidence | Association | PK | PD | PMIDs |
|---|---|---|---|---|---|---|---|
| PA448871 | celecoxib | Chemical | Pathway | associated | 22336956 |
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 37676377 | 2024 | ATM-Mediated translocation of RanBPM regulates DNA damage response by stabilizing p21 in non-small cell lung cancer cells. | 1 |
| 37734420 | 2024 | p21 Prevents the Exhaustion of CD4(+) T Cells Within the Antitumor Immune Response Against Colorectal Cancer. | 0 |
| 38108119 | 2024 | Deoxyribonuclease 1-like 3 inhibits colorectal malignancy through antagonizing NEDD4-triggered CDKN1A ubiquitination. | 0 |
| 38182571 | 2024 | CLIC3 interacts with NAT10 to inhibit N4-acetylcytidine modification of p21 mRNA and promote bladder cancer progression. | 0 |
| 38447798 | 2024 | Transcriptome analysis of polyploid giant cancer cells and their progeny reveals a functional role for p21 in polyploidization and depolyploidization. | 2 |
| 37676377 | 2024 | ATM-Mediated translocation of RanBPM regulates DNA damage response by stabilizing p21 in non-small cell lung cancer cells. | 1 |
| 37734420 | 2024 | p21 Prevents the Exhaustion of CD4(+) T Cells Within the Antitumor Immune Response Against Colorectal Cancer. | 0 |
| 38108119 | 2024 | Deoxyribonuclease 1-like 3 inhibits colorectal malignancy through antagonizing NEDD4-triggered CDKN1A ubiquitination. | 0 |
| 38182571 | 2024 | CLIC3 interacts with NAT10 to inhibit N4-acetylcytidine modification of p21 mRNA and promote bladder cancer progression. | 0 |
| 38447798 | 2024 | Transcriptome analysis of polyploid giant cancer cells and their progeny reveals a functional role for p21 in polyploidization and depolyploidization. | 2 |
| 36017858 | 2023 | Knockdown of PRKD2 Enhances Chemotherapy Sensitivity in Cervical Cancer via the TP53/CDKN1A Pathway. | 0 |
| 36418188 | 2023 | Epstein-Barr virus miR-BART2-5p and miR-BART11-5p regulate cell proliferation, apoptosis, and migration by targeting RB and p21 in gastric carcinoma. | 3 |
| 36876835 | 2023 | The Interplay between Noncoding RNAs and p21 Signaling in Gastrointestinal Cancer: From Tumorigenesis to Metastasis. | 5 |
| 36932196 | 2023 | MORC4 plays a tumor-promoting role in colorectal cancer via regulating PCGF1/CDKN1A axis in vitro and in vivo. | 1 |
| 37012388 | 2023 | N6-methyladenosine reader YTHDF2 promotes multiple myeloma cell proliferation through EGR1/p21(cip1/waf1)/CDK2-Cyclin E1 axis-mediated cell cycle transition. | 5 |
Citation
Delphine Javelaud ; Françoise Besançon
CDKN1A (cyclin-dependent kinase inhibitor 1A)
Atlas Genet Cytogenet Oncol Haematol. 2001-04-01
Online version: http://atlasgeneticsoncology.org/gene/139/cdkn1a
