PTEN (Phosphatase and Tensin homolog deleted on chromosome Ten)
1999-07-01 Michel Longy   AffiliationUnite de Genetique Oncologique, Institut Bergonie, 180, rue de Saint-Genes, 33076 Bordeaux, France
Identity
HGNC
LOCATION
10q23.31
IMAGE

LEGEND
PTEN (Phosphatase and Tensin homolog deleted on chromosome Ten) Hybridization with Kreatech ON PTEN (10q23)/SE 10 probe (Kreatech, Leica Biosystems Inc., US) showing PTEN on 10q23.31 (red signals) - Courtesy Adriana Zamecnikova.
LOCUSID
ALIAS
10q23del,BZS,CWS1,DEC,GLM2,MHAM,MMAC1,PTEN1,PTENbeta,TEP1
FUSION GENES
DNA/RNA
Description
9 exons, all coding; exon 1 has an unusually long 5 untranslated GC-rich region; exon 5 codes for the phosphatase core motif
Transcription
2 major detected transcripts; respectively 2 and 5 kb; open reading frame : 1209 bp
Proteins
Description
403 aminoacids, 47 kDa; N-terminal phosphatase domain (from a.a. 1 to 185) with the catalytic core motif between; a.a. 123-131 encoded by exon 5; C-terminal PDZ binding domain
Localisation
cytoplasmic localization (immunohistochemistry)
Function
phosphatase activity; substrate : phosphatidylinositol 3,4,5-tri phosphate (PIP3); PTEN appears as a negative regulator of the PI3K/AKT signaling pathway; It is unclear if PTEN is able to dephosphorylate a protein substrate in vivo; tumor suppressive function: biallelic inactivation is observed in several tumor-types and inactivating germline mutations are responsible for a cancer prone syndrome, the Cowden disease; anti-invasive and anti-proliferative effects were documented in several cell lines
Mutations
Germinal
germline mutations have been documented in Cowden disease and in Bannayan, Riley, Ruvalcaba phenotype (see below); they are observed along the various exons of the gene except the 9th (never described) and the 1st (very few reports); a mutational hot spot is observed in exon 5 in relation with the catalytic core motif; in the great majority of the cases, inactivating mutations are observed, either by protein truncation, or by misense mutation within the phosphatase domain
Somatic
mutations are observed in several tumor type; they lead to a biallelic inactivation of the gene either by homozygous deletion, or by a combination of point mutation and a large deletion of the second allele
Implicated in
Entity name
Disease
Cowden disease is also known as multiple hamartoma syndrome, a cancer prone condition with autosomal dominant pattern of inheritance and high susceptibility to breast carcinoma and in a less extent to thyroid carcinoma; Bannayan, Ryley, Ruvalcaba syndrome correspond to the pediatric contrepart of Cowden disease with phenotypic overlap between the 2 syndromes (macrocephaly, intestinal polyps, lipomas, genital pigmented macules)
Entity name
sporadic malignant tumors
Disease
somatic mutations were observed mainly in glioblastoma and in endometrial carcinoma, about 30% of these two kinds of tumors showing point mutations; only a few mutations were reported in prostate carcinoma, malignant melanoma, non Hodgkin lymphomas, breast carcinoma
Article Bibliography
| Pubmed ID | Last Year | Title | Authors |
|---|---|---|---|
| 9072974 | 1997 | PTEN, a putative protein tyrosine phosphatase gene mutated in human brain, breast, and prostate cancer. | Li J et al |
| 9593664 | 1998 | The tumor suppressor, PTEN/MMAC1, dephosphorylates the lipid second messenger, phosphatidylinositol 3,4,5-trisphosphate. | Maehama T et al |
| 9467011 | 1998 | Mutation spectrum and genotype-phenotype analyses in Cowden disease and Bannayan-Zonana syndrome, two hamartoma syndromes with germline PTEN mutation. | Marsh DJ et al |
| 9399917 | 1997 | PTEN: sometimes taking it off can be better than putting it on. | Myers MP et al |
| 9090379 | 1997 | Identification of a candidate tumour suppressor gene, MMAC1, at chromosome 10q23.3 that is mutated in multiple advanced cancers. | Steck PA et al |
Other Information
Locus ID:
NCBI: 5728
MIM: 601728
HGNC: 9588
Ensembl: ENSG00000171862
Variants:
dbSNP: 5728
ClinVar: 5728
TCGA: ENSG00000171862
COSMIC: PTEN
RNA/Proteins
| Gene ID | Transcript ID | Uniprot |
|---|---|---|
| ENSG00000171862 | ENST00000371953 | P60484 |
| ENSG00000171862 | ENST00000371953 | F6KD01 |
| ENSG00000171862 | ENST00000472832 | A0A087X033 |
Expression (GTEx)
Pathways
Protein levels (Protein atlas)
PharmGKB
| Entity ID | Name | Type | Evidence | Association | PK | PD | PMIDs |
|---|---|---|---|---|---|---|---|
| PA128406956 | fluorouracil | Chemical | ClinicalAnnotation | associated | PD | ||
| PA33312 | PIK3R1 | Gene | MultilinkAnnotation | associated | 26807692 | ||
| PA443622 | Carcinoma, Non-Small-Cell Lung | Disease | ClinicalAnnotation | associated | PD | ||
| PA444342 | Hamartoma Syndrome, Multiple | Disease | DataAnnotation, Literature, MultilinkAnnotation | associated | 23788249 | ||
| PA445058 | Neoplasm Metastasis | Disease | ClinicalAnnotation | associated | PD | ||
| PA445425 | Prostatic Neoplasms | Disease | MultilinkAnnotation | associated | 24491799 | ||
| PA448771 | capecitabine | Chemical | ClinicalAnnotation | associated | PD | ||
| PA448803 | carboplatin | Chemical | ClinicalAnnotation | associated | PD | ||
| PA449014 | cisplatin | Chemical | ClinicalAnnotation | associated | PD |
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 37031335 | 2024 | Hsa_circITGA4/ miR-1468/EGFR/ PTEN a Master Regulators Axis in Glioblastoma Development and Progression. | 0 |
| 37598867 | 2024 | Cross-Comparison of Inflammatory Skin Disease Transcriptomics Identifies PTEN as a Pathogenic Disease Classifier in Cutaneous Lupus Erythematosus. | 0 |
| 37728571 | 2024 | Spinster homolog 2 reduces malignancies of glioblastoma via PTEN/PI3K/AKT pathway. | 0 |
| 37850885 | 2024 | A critical role of the endothelial S-phase kinase-associated protein 2/phosphatase and tensin homologue axis in angiogenesis and psoriasis. | 0 |
| 37884162 | 2024 | The SNHG10-miR-495-3p-PTEN axis is involved in sevoflurane-mediated protective effects in cardiomyocytes against hypoxia/reoxygenation injury. | 0 |
| 37899509 | 2024 | Concurrent PTEN and PDGFRB Alterations Characterize Storiform Collagenoma. | 0 |
| 37972389 | 2024 | Extracellular vesicle-encapsulated microRNA-296-3p from cancer-associated fibroblasts promotes ovarian cancer development through regulation of the PTEN/AKT and SOCS6/STAT3 pathways. | 4 |
| 38029456 | 2024 | PTEN-mediated FOXO signaling affects autophagy, migration and invasion of rheumatoid arthritis fibroblast-like synoviocytes. | 0 |
| 38065398 | 2024 | PTEN expression can be used as a switch between senescence and apoptosis in breast cancer cells according to a logical model of the G2/M checkpoint. | 0 |
| 38214828 | 2024 | Investigating the effects of PTEN mutations on cGAS-STING pathway in glioblastoma tumours. | 0 |
| 38237562 | 2024 | Coexpression of TP53, BIM, and PTEN Enhances the Therapeutic Efficacy of Non-Small-Cell Lung Cancer. | 1 |
| 38246708 | 2024 | Evaluation of phosphatase and tensin homologue (PTEN) expression in gastric cancer and its relationship with histopathological findings. | 0 |
| 38275605 | 2024 | A Circular RNA Derived from the Pumilio 1 Gene Could Regulate PTEN in Human Cumulus Cells. | 0 |
| 38281224 | 2024 | Correlation of PTEN signaling pathway and miRNA in breast cancer. | 0 |
| 38325773 | 2024 | PTEN hinders the formation of scars by regulating the levels of proteins in the extracellular matrix and promoting the apoptosis of dermal fibroblasts through Bcl-xL. | 0 |
Citation
Michel Longy
PTEN (Phosphatase and Tensin homolog deleted on chromosome Ten)
Atlas Genet Cytogenet Oncol Haematol. 1999-07-01
Online version: http://atlasgeneticsoncology.org/gene/158
