CNTN1 (contactin 1)

2003-08-01  

Identity

HGNC
CNTN1
LOCATION
12q12
LOCUSID
1272
ALIAS
F3,GP135,MYPCN
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 1272
MIM: 600016
HGNC: 2171
Ensembl: ENSG00000018236

Variants:

dbSNP: 1272
ClinVar: 1272
TCGA: ENSG00000018236
COSMIC: CNTN1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000018236ENST00000347616Q12860
ENSG00000018236ENST00000347616A0A024R104
ENSG00000018236ENST00000348761Q12860
ENSG00000018236ENST00000547702Q12860
ENSG00000018236ENST00000547849Q12860
ENSG00000018236ENST00000548005F8VUI8
ENSG00000018236ENST00000548481H0YIJ1
ENSG00000018236ENST00000551295Q12860
ENSG00000018236ENST00000551295A0A024R104
ENSG00000018236ENST00000551424F8VQW3
ENSG00000018236ENST00000552248F8VUI9
ENSG00000018236ENST00000552913F8VX96

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Cell adhesion molecules (CAMs)KEGGko04514
Cell adhesion molecules (CAMs)KEGGhsa04514
Signal TransductionREACTOMER-HSA-162582
Signaling by NOTCHREACTOMER-HSA-157118
Signaling by NOTCH1REACTOMER-HSA-1980143
Activated NOTCH1 Transmits Signal to the NucleusREACTOMER-HSA-2122948
Signaling by NOTCH2REACTOMER-HSA-1980145
NOTCH2 Activation and Transmission of Signal to the NucleusREACTOMER-HSA-2979096
Developmental BiologyREACTOMER-HSA-1266738
Axon guidanceREACTOMER-HSA-422475
L1CAM interactionsREACTOMER-HSA-373760
Neurofascin interactionsREACTOMER-HSA-447043

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
365435402023Neuroaxonal and Glial Markers in Patients of the Same Age With Multiple Sclerosis.4
367340722023The molecular mechanism of γ-aminobutyric acid against AD: the role of CEBPα/circAPLP2/miR-671-5p in regulating CNTN1/2 expression.1
368931512023Contactin-1 links autoimmune neuropathy and membranous glomerulonephritis.2
374372282023Key Molecules in Bladder Cancer Affect Patient Prognosis and Immunotherapy Efficacy: Further Exploration for CNTN1 and EMP1.0
365435402023Neuroaxonal and Glial Markers in Patients of the Same Age With Multiple Sclerosis.4
367340722023The molecular mechanism of γ-aminobutyric acid against AD: the role of CEBPα/circAPLP2/miR-671-5p in regulating CNTN1/2 expression.1
368931512023Contactin-1 links autoimmune neuropathy and membranous glomerulonephritis.2
374372282023Key Molecules in Bladder Cancer Affect Patient Prognosis and Immunotherapy Efficacy: Further Exploration for CNTN1 and EMP1.0
351719552022MicroRNA-200c-targeted contactin 1 facilitates the replication of influenza A virus by accelerating the degradation of MAVS.7
360624922022Neurofilament-light and contactin-1 association with long-term brain atrophy in natalizumab-treated relapsing-remitting multiple sclerosis.3
351719552022MicroRNA-200c-targeted contactin 1 facilitates the replication of influenza A virus by accelerating the degradation of MAVS.7
360624922022Neurofilament-light and contactin-1 association with long-term brain atrophy in natalizumab-treated relapsing-remitting multiple sclerosis.3
331040202021Upregulated CNTN1 is associated with lymph node metastasis and poor prognosis of colorectal cancer.1
335789252021Differential Expression of a Panel of Ten CNTN1-Associated Genes during Prostate Cancer Progression and the Predictive Properties of the Panel Towards Prostate Cancer Relapse.0
342850922021Serum Contactin-1 in CIDP: A Cross-Sectional Study.3

Citation

Dessen P

CNTN1 (contactin 1)

Atlas Genet Cytogenet Oncol Haematol. 2003-08-01

Online version: http://atlasgeneticsoncology.org/gene/40117/cntn1-(contactin-1)