MALAT1 (metastasis associated lung adenocarcinoma transcript 1)

2003-10-01  

Identity

HGNC
MALAT1
LOCATION
11q13.1
LOCUSID
378938
ALIAS
HCN,LINC00047,NCRNA00047,NEAT2,PRO2853
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 378938
MIM: 607924
HGNC: 29665
Ensembl: ENSG00000251562

Variants:

dbSNP: 378938
ClinVar: 378938
TCGA: ENSG00000251562
COSMIC: MALAT1

RNA/Proteins

Expression (GTEx)

0
100
200
300
400
500
600
700
800
900
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA164713176Platinum compoundsChemicalClinicalAnnotationassociatedPD26729200
PA444818Lung NeoplasmsDiseaseClinicalAnnotationassociatedPD26729200

References

Pubmed IDYearTitleCitations
377033152024MALAT1 as a potential salivary biomarker in oral squamous cell carcinoma through targeting miRNA-124.1
378372192024The ATF4-regulated LncRNA MALAT1 promotes odontoblastic differentiation of human dental pulp stem cells via histone demethylase JMJD3: An in vitro study.0
380101092024MALAT1 DEREPRESSES MIR-433-3P-MEDIATED RPTOR SUPPRESSION TO IMPAIR AUTOPHAGY AND DRIVE PYROPTOSIS IN ENDOTOXEMIA.0
380846402024Pleomorphic adenoma with extensive squamous and mucinous metaplasia and a novel MALAT1::PLAG1 fusion gene.0
381595932024CD95 promotes stemness of colorectal cancer cells by lncRNA MALAT1.0
381674332024The interaction between MALAT1 and TUG1 with dietary fatty acid quality indices on visceral adiposity index and body adiposity index.2
382912532024Suppression of MALAT1 promotes human synovial mesenchymal stem cells enhance chondrogenic differentiation and prevent osteoarthritis of the knee in a rat model via regulating miR-212-5p/MyD88 axis.0
383538282024Mechanistic actions of long non-coding RNA MALAT1 within the ovary and at the feto-maternal interface.0
383721032024Effects of the lncRNA MALAT1 gene region rs664589 site mutation on acute myocardial infarction in Chinese Han.1
384136352024The lncRNAs Gas5, MALAT1 and SNHG8 as diagnostic biomarkers for epithelial malignant pleural mesothelioma in Egyptian patients.0
384242342024MALAT1 expression in granulosa cells in PCOS patients with different phenotypes.0
384390312024Expression and diagnostic value of lncRNA MALAT1 and NLRP3 in lower limb atherosclerosis in diabetes.1
384525852024Beyond the genome: MALAT1's role in advancing urologic cancer care.1
384931442024Long noncoding RNA Malat1 protects against osteoporosis and bone metastasis.2
385173882024Evaluation of the clinical significance of long non-coding RNA MALAT1 genetic variants in human lung adenocarcinoma.0

Citation

Dessen P

MALAT1 (metastasis associated lung adenocarcinoma transcript 1)

Atlas Genet Cytogenet Oncol Haematol. 2003-10-01

Online version: http://atlasgeneticsoncology.org/gene/41266