MTHFR (5,10-Methylenetetrahydrofolate reductase)
2005-08-01 Raphael Saffroy  , Antoinette Lemoine  , Brigitte Debuire   AffiliationService de Biochimie et Biologie moleculaire, Hopital Paul Brousse, Faculte de Medecine Paris Sud, 94 800 Villejuif, France
Identity
HGNC
LOCATION
1p36.22
IMAGE

LEGEND
Probe(s) - Courtesy Mariano Rocchi, Resources for Molecular Cytogenetics
LOCUSID
ALIAS
-
FUSION GENES
DNA/RNA
Description
The gene encompasses 19.3 kb of DNA; 11 exons
Transcription
For MTHFR, transcripts of 9.0, 7.2, 6.3, 3.0 and 2.8 kb were observed. The different-sized transcripts result from alternate transcription start sites and multiple polyadenylation signals. The total abundance is low, and the proportion of each transcript differs among tissues.
Proteins

MTHFR metabolic pathway
Description
656 amino acids; 74.6 kDa protein.
Expression
Expression is more intense in testis, intermediate in brain and kidney, and lower in other tissues.
Localisation
Cytosolic
Function
MTHFR catalyzes the conversion of 5,10- methylenetetrahydrofolate to 5-methyltetrahydrofolate, a cosubstrate for homocysteine remethylation to methionine.
Homology
FAD-linked oxidoreductase
Mutations
Germinal
Two common polymorphisms 677C-T and 1298A-C have been identified. These polymorphisms are responsible for the synthesis of a thermolabile form of MTHFR. The 677TT genotype was particularly common in northern China (20%), southern Italy (26%), and Mexico (32%). The 677C>T mutation in the MTHFR gene is an important cause of mild hyperhomocysteinaemia. The second polymorphism at nucleotide position 1298, is not as well characterized.
Implicated in
Entity name
Homocystinuria due to deficiency of methylenetetrahydrofolate reductase activity
Disease
This form of homocystinuria is caused by mutation in the 5,10-alpha-methylenetetrahydrofolate reductase gene. This homocystinuria is autosomal recessive and shows a wide range of clinical symptoms, such as developmental delay, severe mental retardation, perinatal death, psychiatric disturbances, and later-onset neurodegenerative disorders. In the classic form, both thermostable and thermolabile enzyme variants have been identified.
Entity name
Cancer
Disease
In some cancers, folate and other nutrients involved in the MTHFR metabolic pathway appear to interact with MTHFR polymorphisms to further modify cancer risk. In most studies, MTHFR 677TT and 1298CC are associated with moderately reduced colorectal cancer risk, in particular in individuals who had higher folate levels. In individuals with low folate intake and/or high alcohol consumption, cancer risk may be increased. Morever, both adults and children with the variant forms of MTHFR seems to have a decreased risk of lymphoid leukemias. MTHFR polymorphisms were also associated with other cancers as breast, head and neck, liver, gastric or lung cancers.
Oncogenesis
Reduction of 5,10-methylenetetrahydrofolate (methyleneTHF), a donor for methylating dUMP to dTMP in DNA synthesis, to 5-methyltetrahydrofolate (methylTHF), the primary methyl donor for methionine synthesis, is catalyzed by MTHFR. Diminution in the activity of the MTHFR enzyme increases the pool of methyleneTHF at the expense of the pool of methylTHF. Enhanced availability of methyleneTHF in the DNA synthesis pathway reduces misincorporation of uracil into DNA, which might otherwise result in double-strand breaks during uracil excision repair processes, thus increasing the risk of chromosomal aberrations. Morever, the MTHFR polymorphisms influences DNA methylation status through interaction with folate status.
Entity name
Coronary Artery Disease
Disease
The 677TT MTHFR allele was correlated with coronary artery disease. However, the role of this polymorphism in the causation of coronary artery disease is controversial.
Entity name
Depression
Disease
Hyperhomocysteinemia and the 677TT genotype were significantly related to depression.
Article Bibliography
| Pubmed ID | Last Year | Title | Authors |
|---|---|---|---|
| 8758047 | 1996 | Genetic analysis of thermolabile methylenetetrahydrofolate reductase as a risk factor for myocardial infarction. | Adams M et al |
| 12796225 | 2003 | Folate, vitamin B12, homocysteine, and the MTHFR 677C->T polymorphism in anxiety and depression: the Hordaland Homocysteine Study. | Bjelland I et al |
| 15735051 | 2005 | One-carbon metabolism, MTHFR polymorphisms, and risk of breast cancer. | Chen J et al |
| 11929966 | 2002 | A common mutation in the 5,10-methylenetetrahydrofolate reductase gene affects genomic DNA methylation through an interaction with folate status. | Friso S et al |
| 7647779 | 1995 | A candidate genetic risk factor for vascular disease: a common mutation in methylenetetrahydrofolate reductase. | Frosst P et al |
| 9680386 | 1998 | Gene structure of human and mouse methylenetetrahydrofolate reductase (MTHFR). | Goyette P et al |
| 12649184 | 2003 | A common variant of the methylenetetrahydrofolate reductase gene (1p36) is associated with an increased risk of cancer. | Heijmans BT et al |
| 1998339 | 1991 | Thermolabile methylenetetrahydrofolate reductase: an inherited risk factor for coronary artery disease. | Kang SS et al |
| 15688408 | 2005 | Methylenetetrahydrofolate reductase polymorphisms and risk of squamous cell carcinoma of the head and neck: a case-control analysis. | Neumann AS et al |
| 12672676 | 2003 | 5,10-Methylenetetrahydrofolate reductase polymorphisms and leukemia risk: a HuGE minireview. | Robien K et al |
| 1627352 | 1992 | Methylenetetrahydrofolate reductase (MR) deficiency: thermolability of residual MR activity, methionine synthase activity, and methylcobalamin levels in cultured fibroblasts. | Rosenblatt DS et al |
| 15033905 | 2004 | The MTHFR 677C > T polymorphism is associated with an increased risk of hepatocellular carcinoma in patients with alcoholic cirrhosis. | Saffroy R et al |
| 12083967 | 2001 | Polymorphisms in the methylenetetrahydrofolate reductase gene: clinical consequences. | Schwahn B et al |
| 14977639 | 2004 | Polymorphisms in genes involved in folate metabolism and colorectal neoplasia: a HuGE review. | Sharp L et al |
| 12883704 | 2003 | Methylenetetrahydrofolate reductase gene C677T and A1298C polymorphisms in patients with small cell and non-small cell lung cancer. | Siemianowicz K et al |
| 10536004 | 1999 | Polymorphisms in the methylenetetrahydrofolate reductase gene are associated with susceptibility to acute leukemia in adults. | Skibola CF et al |
| 14652285 | 2003 | Esophageal and gastric cardia cancer risk and folate- and vitamin B(12)-related polymorphisms in Linxian, China. | Stolzenberg-Solomon RZ et al |
| 12370778 | 2002 | Multiple transcription start sites and alternative splicing in the methylenetetrahydrofolate reductase gene result in two enzyme isoforms. | Tran P et al |
| 11274424 | 2001 | Methylenetetrahydrofolate reductase (MTHFR) polymorphisms and risk of molecularly defined subtypes of childhood acute leukemia. | Wiemels JL et al |
Other Information
Locus ID:
NCBI: 4524
MIM: 607093
HGNC: 7436
Ensembl: ENSG00000177000
Variants:
dbSNP: 4524
ClinVar: 4524
TCGA: ENSG00000177000
COSMIC: MTHFR
RNA/Proteins
Expression (GTEx)
Pathways
Protein levels (Protein atlas)
PharmGKB
| Entity ID | Name | Type | Evidence | Association | PK | PD | PMIDs |
|---|---|---|---|---|---|---|---|
| PA10505 | vitamin b-complex, plain | Chemical | ClinicalAnnotation | associated | PD | 22926161 | |
| PA10810 | pemetrexed | Chemical | ClinicalAnnotation | associated | PD | 19307503, 20634689, 24732178, 29662106 | |
| PA128406954 | Weight gain | Disease | MultilinkAnnotation | associated | 24279860 | ||
| PA128406956 | fluorouracil | Chemical | ClinicalAnnotation, VipGene | associated | PD | 12083967, 17700593, 18245544, 18299612, 19384296, 20385995, 20638924, 20819423, 23314736, 23407049, 23736036, 24167597, 24980946, 25331073, 26014925, 26967565, 27557140, 27738344, 27864592, 27995989, 29134491, 29845393 | |
| PA130232992 | bevacizumab | Chemical | ClinicalAnnotation | associated | PD | 19307503, 20634689, 29662106 | |
| PA131285527 | oxaliplatin | Chemical | ClinicalAnnotation | associated | PD | 17700593, 18245544, 20385995, 20819423, 23407049, 24980946, 25331073, 27557140, 27864592, 29134491, 29845393 | |
| PA150516584 | Homocysteinemia | Disease | VipGene | associated | 12083967 | ||
| PA164713398 | Vitamin B-complex, Incl. Combinations | Chemical | ClinicalAnnotation | associated | PD | 27035272, 27520898, 31058543 | |
| PA166123368 | schizoaffective disorder | Disease | ClinicalAnnotation | associated | PD | 24725652 | |
| PA166153643 | rs1801131 | Variant | GuidelineAnnotation, VipGene | associated | 15608557, 16187112, 12083967 | ||
| PA166153644 | rs1801133 | Variant | GuidelineAnnotation, VipGene | associated | 12083967, 12738713, 14647408, 15781665, 16187112, 16522920, 16672082, 16777985, 7647779, 11710708 | ||
| PA166154581 | rs4149081 | Variant | GuidelineAnnotation | associated | |||
| PA166154633 | rs11045879 | Variant | GuidelineAnnotation | associated | |||
| PA166182939 | l-methylfolate | Chemical | ClinicalAnnotation | associated | PD | 27035272, 27520898, 31058543 | |
| PA443228 | Abortion, Habitual | Disease | VipGene | associated | 12083967 | ||
| PA443319 | Alzheimer Disease | Disease | VipGene | associated | 12083967 | ||
| PA443425 | Arteriosclerosis | Disease | VipGene | associated | |||
| PA443433 | Arthritis, Juvenile Rheumatoid | Disease | ClinicalAnnotation, VariantAnnotation | ambiguous | PD | 16572443, 18322994, 18381794, 19193698, 19827168, 20386493, 20472929, 20514079, 20595278, 20863444, 21931346, 23095111, 24624914, 27217051 | |
| PA443434 | Arthritis, Rheumatoid | Disease | ClinicalAnnotation, VariantAnnotation, VipGene | ambiguous | PD | 12083967, 16439441, 16572443, 18322994, 18381794, 19193698, 19827168, 19858780, 20386493, 20472929, 20514079, 20595278, 20863444, 21931346, 23095111, 24624914, 25084201, 25618758, 26616421, 27217051 | |
| PA443560 | Breast Neoplasms | Disease | VipGene | associated | 12083967 | ||
| PA443580 | Burkitt Lymphoma | Disease | ClinicalAnnotation | associated | PK | PD | 15781665, 16013960, 16501586, 17323057, 17488658, 17512587, 18368069, 18987660, 21747412, 23089671, 23488607, 24241962, 25065700, 25303299, 28696419, 29683944 |
| PA443622 | Carcinoma, Non-Small-Cell Lung | Disease | ClinicalAnnotation | associated | PD | 19307503, 24732178 | |
| PA443635 | Cardiovascular Diseases | Disease | VipGene | associated | 12083967 | ||
| PA443685 | Uterine Cervical Neoplasms | Disease | VipGene | associated | 12083967 | ||
| PA443736 | Cleft Lip | Disease | VipGene | associated | 12083967 | ||
| PA443737 | Cleft Palate | Disease | VipGene | associated | 12083967 | ||
| PA443756 | Colonic Neoplasms | Disease | ClinicalAnnotation | associated | PD | 24980946, 29134491 | |
| PA443796 | Coronary Artery Disease | Disease | ClinicalAnnotation | associated | PD | 18622257 | |
| PA443933 | Down Syndrome | Disease | VipGene | associated | 12083967 | ||
| PA443937 | Drug Toxicity | Disease | ClinicalAnnotation, VariantAnnotation | ambiguous | PD | 12915598, 16572443, 17323057, 18322994, 18381794, 19193698, 19827168, 20386493, 20472929, 20514079, 20595278, 20863444, 21931346, 23095111, 24624914, 27217051 | |
| PA444065 | Epilepsy | Disease | ClinicalAnnotation | associated | PD | ||
| PA444320 | Graft vs Host Disease | Disease | ClinicalAnnotation | associated | PD | 16920564, 19005482 | |
| PA444552 | Hypertension | Disease | ClinicalAnnotation | associated | PD | 15226090, 16081343 | |
| PA444750 | Leukemia | Disease | ClinicalAnnotation, VariantAnnotation, VipGene | ambiguous | PD | 12083967, 12915598, 16920564, 19005482 | |
| PA444818 | Lung Neoplasms | Disease | VipGene | associated | 12083967 | ||
| PA444845 | Lymphoma, Non-Hodgkin | Disease | ClinicalAnnotation | associated | PK | PD | 15781665, 16013960, 16501586, 17323057, 17488658, 17512587, 18368069, 18987660, 21747412, 23089671, 23488607, 24241962, 25065700, 25303299, 28696419, 29683944 |
| PA444937 | Mesothelioma | Disease | ClinicalAnnotation | associated | PD | 19307503, 24732178 | |
| PA445019 | Myocardial Infarction | Disease | ClinicalAnnotation | associated | PD | 18622257 | |
| PA445062 | Neoplasms | Disease | ClinicalAnnotation, VipGene | associated | PK | PD | 11418485, 12083967, 12453860, 12915598, 14647408, 15051775, 15781665, 16013960, 16019535, 16462575, 16463153, 16501586, 16870553, 17180579, 17323057, 17488658, 17512587, 17700593, 18245544, 18299612, 18458567, 18987660, 19159907, 19307503, 19384296, 20385995, 20634689, 20638924, 20819423, 21605004, 21644011, 21747412, 22143415, 22838948, 23089671, 23314736, 23407049, 23488607, 23648444, 23736036, 24167597, 24241962, 24637499, 25007187, 25065700, 25110820, 25303299, 25331073, 25778468, 26014925, 26967565, 27399166, 27557140, 27738344, 27864592, 27995989, 28696419, 29134491, 29662106, 29683944, 29845393 |
| PA445095 | Neural Tube Defects | Disease | VipGene | associated | 16672082, 12083967 | ||
| PA445204 | Ovarian Neoplasms | Disease | VipGene | associated | 12083967 | ||
| PA445398 | Pre-Eclampsia | Disease | VipGene | associated | 12083967 | ||
| PA445403 | Pregnancy Complications | Disease | VipGene | associated | 12083967 | ||
| PA446108 | Colorectal Neoplasms | Disease | MultilinkAnnotation, VipGene | associated | 12083967, 25823789 | ||
| PA446155 | Precursor Cell Lymphoblastic Leukemia-Lymphoma | Disease | ClinicalAnnotation, VariantAnnotation | ambiguous | PK | PD | 14647408, 15569990, 15781665, 16013960, 16019535, 16501586, 17323057, 17488658, 17512587, 18368069, 18458567, 18987660, 21747412, 22838948, 23089671, 23488607, 23652803, 24241962, 25065700, 25303299, 28696419, 29683944 |
| PA446171 | Leukemia, Myelogenous, Chronic, BCR-ABL Positive | Disease | ClinicalAnnotation | associated | PD | 16920564, 19005482 | |
| PA446198 | Arthritis, Psoriatic | Disease | ClinicalAnnotation | associated | PD | 16572443, 18322994, 18381794, 19193698, 19827168, 20386493, 20472929, 20514079, 20595278, 20863444, 21931346, 23095111, 24624914, 27217051 | |
| PA446286 | Spina Bifida Cystica | Disease | VipGene | associated | 16672082 | ||
| PA446309 | Lymphoma, T-Cell | Disease | ClinicalAnnotation | associated | PK | PD | 15781665, 16013960, 16501586, 17323057, 17488658, 17512587, 18368069, 18987660, 21747412, 23089671, 23488607, 24241962, 25065700, 25303299, 28696419, 29683944 |
| PA446411 | Endometrial Neoplasms | Disease | VipGene | associated | 12083967 | ||
| PA446878 | Cocaine-Related Disorders | Disease | ClinicalAnnotation | associated | PD | 23335901 | |
| PA446892 | Hyperhomocysteinemia | Disease | VipGene | associated | 12083967 | ||
| PA447215 | Psychotic Disorders | Disease | ClinicalAnnotation | associated | PD | ||
| PA447216 | Schizophrenia | Disease | ClinicalAnnotation, VipGene | associated | PD | 12083967, 17976958, 24725652 | |
| PA447278 | Depression | Disease | VipGene | associated | 12083967 | ||
| PA447298 | venous thromboembolism | Disease | VipGene | associated | 12083967 | ||
| PA447321 | Depressive Disorder, Major | Disease | ClinicalAnnotation | associated | PD | 27035272, 27520898, 31058543 | |
| PA448561 | benazepril | Chemical | ClinicalAnnotation | associated | PD | 15226090, 16081343 | |
| PA448771 | capecitabine | Chemical | ClinicalAnnotation | associated | PD | 17700593, 18245544, 18299612, 19384296, 20385995, 20638924, 20819423, 23314736, 23407049, 23736036, 24167597, 25331073, 26014925, 26967565, 27557140, 27738344, 27864592, 27995989, 29134491, 29845393 | |
| PA448785 | carbamazepine | Chemical | VipGene | associated | 12083967 | ||
| PA448794 | carbidopa | Chemical | VipGene | associated | 12083967 | ||
| PA448803 | carboplatin | Chemical | ClinicalAnnotation | associated | PD | 19159907, 19307503, 20634689, 21605004, 27995989, 29662106 | |
| PA449014 | cisplatin | Chemical | ClinicalAnnotation | associated | PD | 19159907, 19307503, 20634689, 21605004, 27995989, 29662106 | |
| PA449061 | clozapine | Chemical | ClinicalAnnotation | associated | PD | 24725652 | |
| PA449376 | disulfiram | Chemical | ClinicalAnnotation | associated | PD | 23335901 | |
| PA449692 | folic acid | Chemical | ClinicalAnnotation, VipGene | associated | PK | PD | 16672082, 19307503, 20634689, 22926161, 29317847, 29662106 |
| PA450198 | leucovorin | Chemical | ClinicalAnnotation | associated | PD | 17700593, 18245544, 20385995, 20819423, 23407049, 24980946, 25331073, 27557140, 27864592, 29134491, 29845393 | |
| PA450213 | levodopa | Chemical | VipGene | associated | 12083967 | ||
| PA450379 | mercaptopurine | Chemical | ClinicalAnnotation, VariantAnnotation | ambiguous | PD | 17323057, 18458567, 22838948 | |
| PA450428 | methotrexate | Chemical | ClinicalAnnotation, GuidelineAnnotation, VariantAnnotation, VipGene | ambiguous | PK | PD | 11418485, 12083967, 12453860, 12915598, 14647408, 15051775, 15569990, 15781665, 15797993, 16013960, 16019535, 16439441, 16462575, 16463153, 16501586, 16572443, 16870553, 16920564, 17180579, 17323057, 17488658, 17512587, 18322994, 18368069, 18381794, 18458567, 18987660, 19005482, 19159907, 19193698, 19827168, 19858780, 20386493, 20472929, 20514079, 20595278, 20863444, 21644011, 21747412, 21931346, 22143415, 22838948, 23089671, 23095111, 23488607, 23648444, 23652803, 24241962, 24624914, 24637499, 25007187, 25065700, 25084201, 25110820, 25303299, 25618758, 25778468, 26014925, 26616421, 27217051, 27399166, 28696419, 29683944 |
| PA450645 | nitrous oxide | Chemical | ClinicalAnnotation | associated | PD | 18580170 | |
| PA450688 | olanzapine | Chemical | ClinicalAnnotation | associated | PD | 24725652 | |
| PA450911 | phenobarbital | Chemical | ClinicalAnnotation | associated | PD | ||
| PA450947 | phenytoin | Chemical | ClinicalAnnotation, VipGene | associated | PD | 12083967 | |
| PA451089 | pravastatin | Chemical | ClinicalAnnotation | associated | PD | 18622257 | |
| PA451547 | sulfasalazine | Chemical | VipGene | associated | 12083967 | ||
| PA451846 | valproic acid | Chemical | VipGene | associated | 12083967 | ||
| PA451892 | cyanocobalamin | Chemical | ClinicalAnnotation | associated | PD | 19307503, 20634689, 29662106 | |
| PA452233 | antipsychotics | Chemical | ClinicalAnnotation | associated | PD | 17976958 |
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 37738148 | 2024 | Association between MTHFR c.677C>T variant and erectile dysfunction among males attending fertility clinic. | 0 |
| 38160599 | 2024 | Association between maternal diet, smoking, and the placenta MTHFR 677C/T genotype and global placental DNA methylation. | 1 |
| 38167461 | 2024 | Association study between genetic polymorphisms in MTHFR and stroke susceptibility in Egyptian population: a case-control study. | 2 |
| 38219184 | 2024 | Association of methylenetetrahydrofolate reductase gene variant C677T and folate levels in non-syndromic cleft lip/palate among Sindhi, Pakistani population. | 0 |
| 38238653 | 2024 | Relationship between methylenetetrahydrofolate reductase C677T gene polymorphism and neutrophil gelatinase-associated lipocalin in early renal injury in H-type hypertension. | 1 |
| 38252186 | 2024 | Association of Methylenetetrahydrofolate Reductase rs1801133 Gene Polymorphism with Cancer Risk and Septin 9 Methylation in Patients with Colorectal Cancer. | 0 |
| 38287462 | 2024 | Congenital septal defects in Karachi, Pakistan: an update of mutational screening by high-resolution melting (HRM) analysis of MTHFR C677T. | 1 |
| 38287840 | 2024 | Association between MTHFR C677T Gene Polymorphisms and the Efficacy of Vitamin Therapy in lowering Homocysteine Levels among Stroke Patients with Hyperhomocysteinemia. | 1 |
| 38517730 | 2024 | Interaction effects of MTHFR C677T and A1298C polymorphisms with maternal glycated haemoglobin levels on adverse birth outcomes. | 1 |
| 38526965 | 2024 | Homozygous MTHFR C677T carriers develop idiopathic portal vein thrombosis 20 years earlier than wild type. | 0 |
| 38527507 | 2024 | [Analysis of 9 patients with adolescence-onset methylenetetrahydrofolate reductase deficiency]. | 0 |
| 38557333 | 2024 | Skin disorders in women with poor obstetric history: MTHFR polymorphisms and importance of preconceptional counseling. | 0 |
| 38579505 | 2024 | Retrospective cohort study of the MTHFR C677T/A1298C polymorphisms and human homocysteine levels in Helicobacter pylori infection. | 0 |
| 38634541 | 2024 | MTHFR and MTRR gene polymorphisms in patients with chronic hepatitis B virus infections in Zigong, Sichuan Province. | 0 |
| 38670392 | 2024 | Effects of MTHFR C677T polymorphism on homocysteine and vitamin D in women with polycystic ovary syndrome. | 0 |
Citation
Raphael Saffroy ; Antoinette Lemoine ; Brigitte Debuire
MTHFR (5,10-Methylenetetrahydrofolate reductase)
Atlas Genet Cytogenet Oncol Haematol. 2005-08-01
Online version: http://atlasgeneticsoncology.org/gene/41448/mthfr
