SRD5A2 (steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2))

2013-05-01   Nelson LS Tang  , Chen Di Liao  

Department of Chemical Pathology, The Chinese University of Hong Kong, China

Identity

HGNC
LOCATION
2p23.1
LOCUSID
ALIAS
-
FUSION GENES

DNA/RNA

Description

Genomic DNA of SRD5A2 gene spans about 58.6 kbp on chromosome 2p23.

Transcription

Five exons with a long 3 UTR.

Proteins

Description

SRD5A2 is a microsomal protein of 254 amino acids in length.

Expression

Androgen sensitive tissues, such as prostate.

Localisation

Microsome.

Function

SRD5A2 protein is an enzyme that converts testosterone to 5-alpha dihydrotestosterone (DHT) and progesterone or corticosterone into 5-alpha-3-oxosteroids. It is active at acidic pH, and is inhibited by finasteride.

Homology

50% homology with human SRD5A1 isoenzyme and 46% homology with rat 5-alpha-reductase.

Mutations

Note

There were over 29 mutations of SRD5A2 gene documented in literature, including 12 single amino acid missense substitutions (Makridakis et al., 2000; Vilchis et al., 2008; Nie et al., 2011). It has been suggested that exon 4 may be a mutation hotspot region on the SRD5A2 gene (Vilchis et al., 2008). Some of the more studied polymorphisms of SRD5A2 included V89L, A49T, and the (TA)n dinucleotide repeat.

Implicated in

Entity name
Prostate cancer
Note
Various genetic studies from multiple ethnic populations have shown genetic variations in the SRD5A2 gene are associated with prostate cancer. Polymorphisms V89L, A29T, and the (TA)n repeat are some of well-known SRD5A2 variation that have been liked to prostate cancer risk. However, these associations are not always consistent. For example, the V89L (rs523349) variant is a missense single nucleotide polymorphism resulting in a valine to leucine substitution at condon 89 that reduced SRD5A2 enzyme activity. More than couple dozen of studies performed genetic association studies between V89L polymorphism and prostate cancer risk since 1997. Although the association has been found significant repeatedly, the results were inconsistent and conflicting (Nam et al., 2001; Salam et al., 2005, Hsing et al., 2001). Recently, a meta-analysis review (Wang et al., 2010) was conducted on 25 genetic studies of SRD5A2 V89L polymorphism and prostate cancer, which included additional subgroup analysis in Asian, African, European and age ≤ 65 group. In overall analysis, no significant association was found between V89L and prostate cancer risk. Subgroup analysis revealed a slight but significant increased risk in European men with at least one L-allele (LL+LV vs VV, OR=1.11; 95%CI=1.03-1.19; P
Oncogenesis
Androgen levels have been suggested to play an important role in the etiology of prostate cancer. The same SRD5A2 genetic variations linked to prostate cancer has also been repeatedly shown to be associated with various circulating androgen level in the blood, including testosterone, dihydrotestosterone and various forms of their metabolites (Makridakis et al., 2000; Allen et al., 2001; Hsing et al., 2001). Therefore, it is possible that these risk-predisposing polymorphisms may cause changes in the SRD5A2 enzyme functional activity that results in the variation of circulating androgens, and ultimately leads to the development of prostate cancer.

Bibliography

Pubmed IDLast YearTitleAuthors

Other Information

Locus ID:

NCBI: 6716
MIM: 607306
HGNC: 11285
Ensembl: ENSG00000277893

Variants:

dbSNP: 6716
ClinVar: 6716
TCGA: ENSG00000277893
COSMIC: SRD5A2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000277893ENST00000622030P31213

Expression (GTEx)

0
5
10
15
20
25
30

Pathways

PathwaySourceExternal ID
Steroid hormone biosynthesisKEGGko00140
Prostate cancerKEGGko05215
Steroid hormone biosynthesisKEGGhsa00140
Prostate cancerKEGGhsa05215
MetabolismREACTOMER-HSA-1430728
Metabolism of lipids and lipoproteinsREACTOMER-HSA-556833
Metabolism of steroid hormonesREACTOMER-HSA-196071
Androgen biosynthesisREACTOMER-HSA-193048

References

Pubmed IDYearTitleCitations
361532422023Fertility potential in 5α-reductase type 2 deficient males.1
368347142023The Genotype-Phenotype Correlation in Human 5α-Reductase Type 2 Deficiency: Classified and Analyzed from a SRD5A2 Structural Perspective.3
377841752023Two genetic variants in the SRD5A2 gene are found to be associated with sex differences in the disease characteristics of patients with chronic hepatitis B virus infection.1
379186762023In vitro functional study of fifteen SRD5A2 variants found in Chinese patients and the relation between the SRD5A2 genotypes and phenotypes.0
361532422023Fertility potential in 5α-reductase type 2 deficient males.1
368347142023The Genotype-Phenotype Correlation in Human 5α-Reductase Type 2 Deficiency: Classified and Analyzed from a SRD5A2 Structural Perspective.3
377841752023Two genetic variants in the SRD5A2 gene are found to be associated with sex differences in the disease characteristics of patients with chronic hepatitis B virus infection.1
379186762023In vitro functional study of fifteen SRD5A2 variants found in Chinese patients and the relation between the SRD5A2 genotypes and phenotypes.0
351351812022Mutations in AR or SRD5A2 Genes: Clinical Findings, Endocrine Pitfalls, and Genetic Features of Children with 46,XY DSD.1
353313212022Mutational analysis of compound heterozygous mutation p.Q6X/p.H232R in SRD5A2 causing 46,XY disorder of sex development.2
357009422022Clinical, Hormonal, and Genetic Characteristics of 5α-Reductase Type 2 Deficiency in 103 Chinese Patients.2
363449742022Upregulation of mir-1199-5p is associated with reduced type 2 5-α reductase expression in benign prostatic hyperplasia.0
351351812022Mutations in AR or SRD5A2 Genes: Clinical Findings, Endocrine Pitfalls, and Genetic Features of Children with 46,XY DSD.1
353313212022Mutational analysis of compound heterozygous mutation p.Q6X/p.H232R in SRD5A2 causing 46,XY disorder of sex development.2
357009422022Clinical, Hormonal, and Genetic Characteristics of 5α-Reductase Type 2 Deficiency in 103 Chinese Patients.2

Citation

Nelson LS Tang ; Chen Di Liao

SRD5A2 (steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2))

Atlas Genet Cytogenet Oncol Haematol. 2013-05-01

Online version: http://atlasgeneticsoncology.org/gene/42385/img/js/lib/js/web-card-gene.js