TREX1 (three prime repair exonuclease 1)

2003-08-01  

Identity

HGNC
LOCATION
3p21.31
LOCUSID
ALIAS
AGS1,CRV,DRN3,HERNS,RVCLS
FUSION GENES

Other Information

Locus ID:

NCBI: 11277
MIM: 606609
HGNC: 12269
Ensembl: ENSG00000213689

Variants:

dbSNP: 11277
ClinVar: 11277
TCGA: ENSG00000213689
COSMIC: TREX1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000213689ENST00000433541C9J052
ENSG00000213689ENST00000444177Q9NSU2
ENSG00000213689ENST00000444177Q5TZT0
ENSG00000213689ENST00000456089C9J052
ENSG00000213689ENST00000492235C9J052
ENSG00000213689ENST00000625293Q9NSU2
ENSG00000213689ENST00000635452C9J052

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90

Pathways

PathwaySourceExternal ID
Cytosolic DNA-sensing pathwayKEGGko04623
Cytosolic DNA-sensing pathwayKEGGhsa04623
Immune SystemREACTOMER-HSA-168256
Innate Immune SystemREACTOMER-HSA-168249
Cytosolic sensors of pathogen-associated DNAREACTOMER-HSA-1834949
STING mediated induction of host immune responsesREACTOMER-HSA-1834941
IRF3-mediated induction of type I IFNREACTOMER-HSA-3270619
Regulation of innate immune responses to cytosolic DNAREACTOMER-HSA-3134975
Regulation by TREX1REACTOMER-HSA-3248023

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
381296592024TREX1 is required for microglial cholesterol homeostasis and oligodendrocyte terminal differentiation in human neural assembloids.0
386758422024The Expression Levels of TREX1 and IFN-α Are Associated with Immune Reconstitution in HIV-1-Infected Individuals.0
388241332024Inherited C-terminal TREX1 variants disrupt homology-directed repair to cause senescence and DNA damage phenotypes in Drosophila, mice, and humans.1
389263382024MRE11 and TREX1 control senescence by coordinating replication stress and interferon signaling.0
381296592024TREX1 is required for microglial cholesterol homeostasis and oligodendrocyte terminal differentiation in human neural assembloids.0
386758422024The Expression Levels of TREX1 and IFN-α Are Associated with Immune Reconstitution in HIV-1-Infected Individuals.0
388241332024Inherited C-terminal TREX1 variants disrupt homology-directed repair to cause senescence and DNA damage phenotypes in Drosophila, mice, and humans.1
389263382024MRE11 and TREX1 control senescence by coordinating replication stress and interferon signaling.0
365867372023TREX1 p.A129fs and p.Y305C variants in a large multi-ethnic cohort of CADASIL-like unrelated patients.1
372986112023TREX1 531C/T Polymorphism and Autoantibodies Associated with the Immune Status of HIV-1-Infected Individuals.1
377287062023Association of TREX1 polymorphism with disease progression in human immunodeficiency virus type-1 (HIV-1) infected patients.1
365867372023TREX1 p.A129fs and p.Y305C variants in a large multi-ethnic cohort of CADASIL-like unrelated patients.1
372986112023TREX1 531C/T Polymorphism and Autoantibodies Associated with the Immune Status of HIV-1-Infected Individuals.1
377287062023Association of TREX1 polymorphism with disease progression in human immunodeficiency virus type-1 (HIV-1) infected patients.1
344001952022Photosensitivity and cGAS-Dependent IFN-1 Activation in Patients with Lupus and TREX1 Deficiency.8

Citation

Dessen P

TREX1 (three prime repair exonuclease 1)

Atlas Genet Cytogenet Oncol Haematol. 2003-08-01

Online version: http://atlasgeneticsoncology.org/gene/42696/trex1-(three-prime-repair-exonuclease-1)