CNBP (CCHC-type zinc finger nucleic acid binding protein)

2007-03-01  

Identity

HGNC
CNBP
LOCATION
3q21.3
LOCUSID
7555
ALIAS
CNBP1,DM2,PROMM,RNF163,ZCCHC22,ZNF9
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 7555
MIM: 116955
HGNC: 13164
Ensembl: ENSG00000169714

Variants:

dbSNP: 7555
ClinVar: 7555
TCGA: ENSG00000169714
COSMIC: CNBP

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000169714ENST00000422453P62633
ENSG00000169714ENST00000422453A0A0S2Z4K2
ENSG00000169714ENST00000441626P62633
ENSG00000169714ENST00000446936P62633
ENSG00000169714ENST00000451728P62633
ENSG00000169714ENST00000500450P62633
ENSG00000169714ENST00000502976P62633
ENSG00000169714ENST00000502976A0A0S2Z4Q3
ENSG00000169714ENST00000504813P62633
ENSG00000169714ENST00000512338D6RAT4

Expression (GTEx)

0
100
200
300
400
500
600
700
800
900
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

References

Pubmed IDYearTitleCitations
166248432006DM2 intronic expansions: evidence for CCUG accumulation without flanking sequence or effects on ZNF9 mRNA processing or protein expression.48
276184852016A G-Rich Motif in the lncRNA Braveheart Interacts with a Zinc-Finger Transcription Factor to Specify the Cardiovascular Lineage.42
283763412017Myotonic dystrophy: approach to therapy.29
209717342010Mutant (CCTG)n expansion causes abnormal expression of zinc finger protein 9 (ZNF9) in myotonic dystrophy type 2.25
264609452015Non-canonical Hedgehog/AMPK-Mediated Control of Polyamine Metabolism Supports Neuronal and Medulloblastoma Cell Growth.24
283296892017The Human CCHC-type Zinc Finger Nucleic Acid-Binding Protein Binds G-Rich Elements in Target mRNA Coding Sequences and Promotes Translation.24
173272192007The myotonic dystrophy type 2 protein ZNF9 is part of an ITAF complex that promotes cap-independent translation.23
163760582006Effect of the [CCTG]n repeat expansion on ZNF9 expression in myotonic dystrophy type II (DM2).18
176729182007Violating the splicing rules: TG dinucleotides function as alternative 3' splice sites in U2-dependent introns.17
291999582017LAST, a c-Myc-inducible long noncoding RNA, cooperates with CNBP to promote CCND1 mRNA stability in human cells.16

Citation

Dessen P

CNBP (CCHC-type zinc finger nucleic acid binding protein)

Atlas Genet Cytogenet Oncol Haematol. 2007-03-01

Online version: http://atlasgeneticsoncology.org/gene/42961/cnbp-(cchc-type-zinc-finger-nucleic-acid-binding-protein)