SYNJ1 (synaptojanin 1)

2006-10-01  

Identity

HGNC
LOCATION
21q22.11
LOCUSID
ALIAS
DEE53,EIEE53,INPP5G,PARK20
FUSION GENES

Other Information

Locus ID:

NCBI: 8867
MIM: 604297
HGNC: 11503
Ensembl: ENSG00000159082

Variants:

dbSNP: 8867
ClinVar: 8867
TCGA: ENSG00000159082
COSMIC: SYNJ1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000159082ENST00000357345O43426
ENSG00000159082ENST00000382491J3KPK1
ENSG00000159082ENST00000382499C9JFZ1
ENSG00000159082ENST00000418301H7BZ56
ENSG00000159082ENST00000429236C9JW66
ENSG00000159082ENST00000433931J3KQV8
ENSG00000159082ENST00000438952H7BZC2
ENSG00000159082ENST00000456084C9J1Z6
ENSG00000159082ENST00000630077A0A0D9SGJ6

Expression (GTEx)

0
5
10
15
20
25
30
35
40

Pathways

PathwaySourceExternal ID
Inositol phosphate metabolismKEGGko00562
Phosphatidylinositol signaling systemKEGGko04070
Inositol phosphate metabolismKEGGhsa00562
Phosphatidylinositol signaling systemKEGGhsa04070
Metabolic pathwaysKEGGhsa01100
Vesicle-mediated transportREACTOMER-HSA-5653656
Membrane TraffickingREACTOMER-HSA-199991
MetabolismREACTOMER-HSA-1430728
Inositol phosphate metabolismREACTOMER-HSA-1483249
Synthesis of IP3 and IP4 in the cytosolREACTOMER-HSA-1855204
Synthesis of IP2, IP, and Ins in the cytosolREACTOMER-HSA-1855183
Metabolism of lipids and lipoproteinsREACTOMER-HSA-556833
Phospholipid metabolismREACTOMER-HSA-1483257
PI MetabolismREACTOMER-HSA-1483255
Synthesis of PIPs at the plasma membraneREACTOMER-HSA-1660499
Clathrin-mediated endocytosisREACTOMER-HSA-8856828

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
377883282023α-Synuclein induces deficiency in clathrin-mediated endocytosis through inhibiting synaptojanin1 expression.1
377883282023α-Synuclein induces deficiency in clathrin-mediated endocytosis through inhibiting synaptojanin1 expression.1
336770352021Asparagine endopeptidase cleaves synaptojanin 1 and triggers synaptic dysfunction in Parkinson's disease.4
336770352021Asparagine endopeptidase cleaves synaptojanin 1 and triggers synaptic dysfunction in Parkinson's disease.4
319137572020TGFβ receptor endocytosis and Smad signaling require synaptojanin1, PI3K-C2α-, and INPP4B-mediated phosphoinositide conversions.12
324934512020The lipid phosphatase Synaptojanin 1 undergoes a significant alteration in expression and solubility and is associated with brain lesions in Alzheimer's disease.12
333493352020A structure of substrate-bound Synaptojanin1 provides new insights in its mechanism and the effect of disease mutations.6
319137572020TGFβ receptor endocytosis and Smad signaling require synaptojanin1, PI3K-C2α-, and INPP4B-mediated phosphoinositide conversions.12
324934512020The lipid phosphatase Synaptojanin 1 undergoes a significant alteration in expression and solubility and is associated with brain lesions in Alzheimer's disease.12
333493352020A structure of substrate-bound Synaptojanin1 provides new insights in its mechanism and the effect of disease mutations.6
317518652019A novel homozygous SYNJ1 mutation in two siblings with typical Parkinson's disease.13
317518652019A novel homozygous SYNJ1 mutation in two siblings with typical Parkinson's disease.13
284213332018Identification of putative second genetic hits in schizophrenia carriers of high-risk copy number variants and resequencing in additional samples.4
295151842018Alteration of endosomal trafficking is associated with early-onset parkinsonism caused by SYNJ1 mutations.34
298745832018Excess Synaptojanin 1 Contributes to Place Cell Dysfunction and Memory Deficits in the Aging Hippocampus in Three Types of Alzheimer's Disease.29

Citation

Dessen P

SYNJ1 (synaptojanin 1)

Atlas Genet Cytogenet Oncol Haematol. 2006-10-01

Online version: http://atlasgeneticsoncology.org/gene/43521/synj1-(synaptojanin-1)