LTC4S (leukotriene C4 synthase)

2007-06-01  

Identity

HGNC
LOCATION
5q35.3
LOCUSID
ALIAS
-

Other Information

Locus ID:

NCBI: 4056
MIM: 246530
HGNC: 6719
Ensembl: ENSG00000213316

Variants:

dbSNP: 4056
ClinVar: 4056
TCGA: ENSG00000213316
COSMIC: LTC4S

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000213316ENST00000292596Q16873
ENSG00000213316ENST00000401985B5MCC3
ENSG00000213316ENST00000486713A0A286YF10
ENSG00000213316ENST00000505170D6RJA1

Pathways

PathwaySourceExternal ID
Arachidonic acid metabolismKEGGko00590
Arachidonic acid metabolismKEGGhsa00590
Metabolic pathwaysKEGGhsa01100
MetabolismREACTOMER-HSA-1430728
Metabolism of lipids and lipoproteinsREACTOMER-HSA-556833
Arachidonic acid metabolismREACTOMER-HSA-2142753
Synthesis of Leukotrienes (LT) and Eoxins (EX)REACTOMER-HSA-2142691
Synthesis of 5-eicosatetraenoic acidsREACTOMER-HSA-2142688
Synthesis of Lipoxins (LX)REACTOMER-HSA-2142700

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA443450AsthmaDiseaseClinicalAnnotationassociatedPD
PA445999UrticariaDiseaseClinicalAnnotation, VariantAnnotationassociatedPD15100686, 16433794, 19862937
PA448497aspirinChemicalClinicalAnnotation, VariantAnnotationassociatedPD15100686, 16433794, 19862937
PA450546montelukastChemicalClinicalAnnotationassociatedPD

References

Pubmed IDYearTitleCitations
344375742021Effect of TGF-β1 on eosinophils to induce cysteinyl leukotriene E4 production in aspirin-exacerbated respiratory disease.2
344375742021Effect of TGF-β1 on eosinophils to induce cysteinyl leukotriene E4 production in aspirin-exacerbated respiratory disease.2
273653932016Phosphorylation of Leukotriene C4 Synthase at Serine 36 Impairs Catalytic Activity.5
273653932016Phosphorylation of Leukotriene C4 Synthase at Serine 36 Impairs Catalytic Activity.5
243668662014Crystal structures of leukotriene C4 synthase in complex with product analogs: implications for the enzyme mechanism.9
243668662014Crystal structures of leukotriene C4 synthase in complex with product analogs: implications for the enzyme mechanism.9
238285622013Lack of effect of common single nucleotide polymorphisms in leukotriene pathway genes on platelet reactivity in patients with diabetes.3
238892442013Elevated levels of leukotriene C4 synthase mRNA distinguish a subpopulation of eosinophilic oesophagitis patients.14
238285622013Lack of effect of common single nucleotide polymorphisms in leukotriene pathway genes on platelet reactivity in patients with diabetes.3
238892442013Elevated levels of leukotriene C4 synthase mRNA distinguish a subpopulation of eosinophilic oesophagitis patients.14
222172032012Pre-steady-state kinetic characterization of thiolate anion formation in human leukotriene C₄ synthase.5
227227512012Association of the -1072G/A polymorphism in the LTC4S gene with asthma in an Indian population.3
228848582012The -444A/C polymorphism in the LTC4S gene and the risk of asthma: a meta-analysis.8
230792782012Genetic variation in members of the leukotrienes biosynthesis pathway confers risk of ischemic stroke in Eastern Han Chinese.5
222172032012Pre-steady-state kinetic characterization of thiolate anion formation in human leukotriene C₄ synthase.5

Citation

Dessen P

LTC4S (leukotriene C4 synthase)

Atlas Genet Cytogenet Oncol Haematol. 2007-06-01

Online version: http://atlasgeneticsoncology.org/gene/44018/ltc4s-(leukotriene-c4-synthase)