CLDND1 (claudin domain containing 1)

2007-07-01  

Identity

HGNC
CLDND1
LOCATION
3q11.2
LOCUSID
56650
ALIAS
C3orf4,GENX-3745,Z38
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 56650
HGNC: 1322
Ensembl: ENSG00000080822

Variants:

dbSNP: 56650
ClinVar: 56650
TCGA: ENSG00000080822
COSMIC: CLDND1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000080822ENST00000341181Q9NY35
ENSG00000080822ENST00000394180Q9NY35
ENSG00000080822ENST00000394181A0A0R4J2F2
ENSG00000080822ENST00000394185Q9NY35
ENSG00000080822ENST00000502288D6R9K1
ENSG00000080822ENST00000502299D6RDI6
ENSG00000080822ENST00000503004Q9NY35
ENSG00000080822ENST00000503621D6RIU2
ENSG00000080822ENST00000503799D6RAZ7
ENSG00000080822ENST00000506575D6RD48
ENSG00000080822ENST00000506885H0Y8T9
ENSG00000080822ENST00000507874D6RC11
ENSG00000080822ENST00000507944D6RDY1
ENSG00000080822ENST00000508071D6RDP6
ENSG00000080822ENST00000508659D6RHU6
ENSG00000080822ENST00000508902D6RFX6
ENSG00000080822ENST00000510541D6RB31
ENSG00000080822ENST00000510545Q9NY35
ENSG00000080822ENST00000511081Q9NY35
ENSG00000080822ENST00000511667D6RCE6
ENSG00000080822ENST00000512147D6RCP3
ENSG00000080822ENST00000513287Q9NY35
ENSG00000080822ENST00000513452D6RCR8
ENSG00000080822ENST00000513873H0YA53
ENSG00000080822ENST00000514537D6R9S8
ENSG00000080822ENST00000515620D6RA76

Expression (GTEx)

0
100
200
300
400
500
600
700
800
900
1000
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
281304192017The retinoic acid receptor-related orphan receptor α positively regulates tight junction protein claudin domain-containing 1 mRNA expression in human brain endothelial cells.8
282441412017Claudin domain containing 1 contributing to endothelial cell adhesion decreases in presence of cerebellar hemorrhage.6
288490122017Long non-coding RNA Z38 promotes cell proliferation and metastasis in human renal cell carcinoma.0
281304192017The retinoic acid receptor-related orphan receptor α positively regulates tight junction protein claudin domain-containing 1 mRNA expression in human brain endothelial cells.8
282441412017Claudin domain containing 1 contributing to endothelial cell adhesion decreases in presence of cerebellar hemorrhage.6
288490122017Long non-coding RNA Z38 promotes cell proliferation and metastasis in human renal cell carcinoma.0
260833922015Down Regulation of CLDND1 Induces Apoptosis in Breast Cancer Cells.9
260833922015Down Regulation of CLDND1 Induces Apoptosis in Breast Cancer Cells.9
173168882007Identification of genes differentially expressed in human primary lung squamous cell carcinoma.34
173168882007Identification of genes differentially expressed in human primary lung squamous cell carcinoma.34

Citation

Dessen P

CLDND1 (claudin domain containing 1)

Atlas Genet Cytogenet Oncol Haematol. 2007-07-01

Online version: http://atlasgeneticsoncology.org/gene/47585/deep-insight-explorer/css/hgnc