CALR3 (calreticulin 3)

2008-03-01

Identity

HGNC

CALR3

LOCATION

19p13.11

LOCUSID

125972

ALIAS

CMH19,CRT2,CT93

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 125972
MIM: 611414
HGNC: 20407
Ensembl: ENSG00000269058

Variants:

dbSNP: 125972
ClinVar: 125972
TCGA: ENSG00000269058
COSMIC: CALR3

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000269058	ENST00000269881	Q96L12
ENSG00000269058	ENST00000269881	A0A140VJF7
ENSG00000269058	ENST00000600762	M0R0Y8

Expression (GTEx)

100

150

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
17975137	2007	Identification of a novel cancer-testis antigen CRT2 frequently expressed in various cancers using representational differential analysis.	2
17975137	2007	Identification of a novel cancer-testis antigen CRT2 frequently expressed in various cancers using representational differential analysis.	2
21590275	2011	Calreticulin-2 is localized in the lumen of the endoplasmic reticulum but is not a Ca2+ -binding protein.	6
21590275	2011	Calreticulin-2 is localized in the lumen of the endoplasmic reticulum but is not a Ca2+ -binding protein.	6
26252478	2015	Lack of ADAM2, CALR3 and SAGE1 Cancer/Testis Antigen Expression in Lung and Breast Cancer.	6
26252478	2015	Lack of ADAM2, CALR3 and SAGE1 Cancer/Testis Antigen Expression in Lung and Breast Cancer.	6
29988065	2018	Lack of evidence for a causal role of CALR3 in monogenic cardiomyopathy.	0
29988065	2018	Lack of evidence for a causal role of CALR3 in monogenic cardiomyopathy.	0

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Citation

Dessen P

CALR3 (calreticulin 3)

Atlas Genet Cytogenet Oncol Haematol. 2008-03-01

Online version: http://atlasgeneticsoncology.org/gene/50077/calr3-(calreticulin-3)