SLC22A17 (solute carrier family 22 member 17)

2009-03-01  

Identity

HGNC
SLC22A17
LOCATION
14q11.2
LOCUSID
51310
ALIAS
24p3R,BOCT,BOIT,NGALR,NGALR2,NGALR3,hBOIT
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 51310
MIM: 611461
HGNC: 23095
Ensembl: ENSG00000092096

Variants:

dbSNP: 51310
ClinVar: 51310
TCGA: ENSG00000092096
COSMIC: SLC22A17

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000092096ENST00000354772A0A1C7CYV9
ENSG00000092096ENST00000397260H9KVA1
ENSG00000092096ENST00000397267Q8WUG5
ENSG00000092096ENST00000474057H9KVA1
ENSG00000092096ENST00000474774A0A1B0GUC0
ENSG00000092096ENST00000636431A0A1B0GVR9

Expression (GTEx)

0
100
200
300
400
500
600
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Transmembrane transport of small moleculesREACTOMER-HSA-382551
Iron uptake and transportREACTOMER-HSA-917937

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
383911652024The mRNA of solute carrier family 22, member 17 (SLC22A17) plays the potential diagnostic and prognostic role in advantage non-small cell lung cancer patients.0
387384282024SLC22A17 as a Cell Death-Linked Regulator of Tight Junctions in Cerebral Ischemia.2
383911652024The mRNA of solute carrier family 22, member 17 (SLC22A17) plays the potential diagnostic and prognostic role in advantage non-small cell lung cancer patients.0
387384282024SLC22A17 as a Cell Death-Linked Regulator of Tight Junctions in Cerebral Ischemia.2
321645942020Identification of immune cells and mRNA associated with prognosis of gastric cancer.31
321645942020Identification of immune cells and mRNA associated with prognosis of gastric cancer.31
301386752018The expression analysis of NGAL and NGALR in clear cell renal cell carcinoma.7
301386752018The expression analysis of NGAL and NGALR in clear cell renal cell carcinoma.7
266353662016Biochemical and Structural Characterization of the Interaction between the Siderocalin NGAL/LCN2 (Neutrophil Gelatinase-associated Lipocalin/Lipocalin 2) and the N-terminal Domain of Its Endocytic Receptor SLC22A17.23
266353662016Biochemical and Structural Characterization of the Interaction between the Siderocalin NGAL/LCN2 (Neutrophil Gelatinase-associated Lipocalin/Lipocalin 2) and the N-terminal Domain of Its Endocytic Receptor SLC22A17.23
262306412015Genetic variants in SLC22A17 and SLC22A7 are associated with anthracycline-induced cardiotoxicity in children.55
262306412015Genetic variants in SLC22A17 and SLC22A7 are associated with anthracycline-induced cardiotoxicity in children.55
244524572014Lipocalin 2 decreases senescence of bone marrow-derived mesenchymal stem cells under sub-lethal doses of oxidative stress.17
244524572014Lipocalin 2 decreases senescence of bone marrow-derived mesenchymal stem cells under sub-lethal doses of oxidative stress.17
227282792012NGAL and NGALR overexpression in human hepatocellular carcinoma toward a molecular prognostic classification.21

Citation

Dessen P

SLC22A17 (solute carrier family 22 member 17)

Atlas Genet Cytogenet Oncol Haematol. 2009-03-01

Online version: http://atlasgeneticsoncology.org/gene/50715/slc22a17-(solute-carrier-family-22-member-17)