SPTAN1 (spectrin alpha, non-erythrocytic 1)

2009-05-01  

Identity

HGNC
LOCATION
9q34.11
LOCUSID
ALIAS
DEE5,EIEE5,NEAS,SPTA2
FUSION GENES

Other Information

Locus ID:

NCBI: 6709
MIM: 182810
HGNC: 11273
Ensembl: ENSG00000197694

Variants:

dbSNP: 6709
ClinVar: 6709
TCGA: ENSG00000197694
COSMIC: SPTAN1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000197694ENST00000358161Q13813
ENSG00000197694ENST00000358161A0A384P5S9
ENSG00000197694ENST00000372731Q13813
ENSG00000197694ENST00000372739Q13813
ENSG00000197694ENST00000627441A0A0D9SFF6
ENSG00000197694ENST00000630804A0A0D9SF54
ENSG00000197694ENST00000630866A0A0D9SGF6
ENSG00000197694ENST00000630981A0A0D9SFH4
ENSG00000197694ENST00000635806A0A1B0GTD1
ENSG00000197694ENST00000636257A0A1B0GWE2
ENSG00000197694ENST00000636337A0A1B0GW19
ENSG00000197694ENST00000636483A0A1B0GTB7
ENSG00000197694ENST00000637032A0A1B0GUH3
ENSG00000197694ENST00000637820A0A1B0GUN2
ENSG00000197694ENST00000637867A0A1B0GWE2
ENSG00000197694ENST00000637903A0A1B0GV13

Expression (GTEx)

0
50
100
150
200
250
300
350

Pathways

PathwaySourceExternal ID
ApoptosisKEGGko04210
ApoptosisKEGGhsa04210
Metabolism of proteinsREACTOMER-HSA-392499
Post-translational protein modificationREACTOMER-HSA-597592
Asparagine N-linked glycosylationREACTOMER-HSA-446203
Transport to the Golgi and subsequent modificationREACTOMER-HSA-948021
ER to Golgi Anterograde TransportREACTOMER-HSA-199977
Immune SystemREACTOMER-HSA-168256
Innate Immune SystemREACTOMER-HSA-168249
DAP12 interactionsREACTOMER-HSA-2172127
DAP12 signalingREACTOMER-HSA-2424491
RAF/MAP kinase cascadeREACTOMER-HSA-5673001
Fc epsilon receptor (FCERI) signalingREACTOMER-HSA-2454202
FCERI mediated MAPK activationREACTOMER-HSA-2871796
Cytokine Signaling in Immune systemREACTOMER-HSA-1280215
Signaling by InterleukinsREACTOMER-HSA-449147
Interleukin-2 signalingREACTOMER-HSA-451927
Interleukin receptor SHC signalingREACTOMER-HSA-912526
Interleukin-3, 5 and GM-CSF signalingREACTOMER-HSA-512988
Signal TransductionREACTOMER-HSA-162582
Signaling by EGFRREACTOMER-HSA-177929
GRB2 events in EGFR signalingREACTOMER-HSA-179812
SHC1 events in EGFR signalingREACTOMER-HSA-180336
Signaling by Insulin receptorREACTOMER-HSA-74752
Insulin receptor signalling cascadeREACTOMER-HSA-74751
IRS-mediated signallingREACTOMER-HSA-112399
SOS-mediated signallingREACTOMER-HSA-112412
Signalling by NGFREACTOMER-HSA-166520
NGF signalling via TRKA from the plasma membraneREACTOMER-HSA-187037
Signalling to ERKsREACTOMER-HSA-187687
Signalling to RASREACTOMER-HSA-167044
Signalling to p38 via RIT and RINREACTOMER-HSA-187706
Prolonged ERK activation eventsREACTOMER-HSA-169893
Frs2-mediated activationREACTOMER-HSA-170968
ARMS-mediated activationREACTOMER-HSA-170984
Signaling by PDGFREACTOMER-HSA-186797
Downstream signal transductionREACTOMER-HSA-186763
Signaling by VEGFREACTOMER-HSA-194138
VEGFA-VEGFR2 PathwayREACTOMER-HSA-4420097
VEGFR2 mediated cell proliferationREACTOMER-HSA-5218921
Signaling by SCF-KITREACTOMER-HSA-1433557
MAPK family signaling cascadesREACTOMER-HSA-5683057
MAPK1/MAPK3 signalingREACTOMER-HSA-5684996
Signaling by GPCRREACTOMER-HSA-372790
Gastrin-CREB signalling pathway via PKC and MAPKREACTOMER-HSA-881907
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)REACTOMER-HSA-2404192
IGF1R signaling cascadeREACTOMER-HSA-2428924
IRS-related events triggered by IGF1RREACTOMER-HSA-2428928
Signaling by LeptinREACTOMER-HSA-2586552
Vesicle-mediated transportREACTOMER-HSA-5653656
Membrane TraffickingREACTOMER-HSA-199991
Cell-Cell communicationREACTOMER-HSA-1500931
Nephrin interactionsREACTOMER-HSA-373753
Programmed Cell DeathREACTOMER-HSA-5357801
ApoptosisREACTOMER-HSA-109581
Apoptotic execution phaseREACTOMER-HSA-75153
Apoptotic cleavage of cellular proteinsREACTOMER-HSA-111465
Caspase-mediated cleavage of cytoskeletal proteinsREACTOMER-HSA-264870
Developmental BiologyREACTOMER-HSA-1266738
Axon guidanceREACTOMER-HSA-422475
NCAM signaling for neurite out-growthREACTOMER-HSA-375165
L1CAM interactionsREACTOMER-HSA-373760
Interaction between L1 and AnkyrinsREACTOMER-HSA-445095
COPI-mediated anterograde transportREACTOMER-HSA-6807878
RET signalingREACTOMER-HSA-8853659
Neutrophil degranulationREACTOMER-HSA-6798695

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
363315502023Expanding SPTAN1 monoallelic variant associated disorders: From epileptic encephalopathy to pure spastic paraplegia and ataxia.1
363315502023Expanding SPTAN1 monoallelic variant associated disorders: From epileptic encephalopathy to pure spastic paraplegia and ataxia.1
351505942022De Novo and Dominantly Inherited SPTAN1 Mutations Cause Spastic Paraplegia and Cerebellar Ataxia.6
351505942022De Novo and Dominantly Inherited SPTAN1 Mutations Cause Spastic Paraplegia and Cerebellar Ataxia.6
340675432021α-Fodrin in Cytoskeletal Organization and the Activity of Certain Key Microtubule Kinesins.1
340675432021α-Fodrin in Cytoskeletal Organization and the Activity of Certain Key Microtubule Kinesins.1
322366292020Expression and secretion of the pro‑inflammatory cytokine IL‑8 is increased in colorectal cancer cells following the knockdown of non‑erythroid spectrin αII.4
328117702020Intrafamilial variability in SPTAN1-related disorder: From benign convulsions with mild gastroenteritis to developmental encephalopathy.6
322366292020Expression and secretion of the pro‑inflammatory cytokine IL‑8 is increased in colorectal cancer cells following the knockdown of non‑erythroid spectrin αII.4
328117702020Intrafamilial variability in SPTAN1-related disorder: From benign convulsions with mild gastroenteritis to developmental encephalopathy.6
308562142019Downregulation of SPTAN1 is related to MLH1 deficiency and metastasis in colorectal cancer.18
310648432019Defining new mechanistic roles for αII spectrin in cardiac function.6
313324382019Nonsense mutations in alpha-II spectrin in three families with juvenile onset hereditary motor neuropathy.13
314551862019α-Fodrin is required for the organization of functional microtubules during mitosis.4
315155232019SPTAN1 variants as a potential cause for autosomal recessive hereditary spastic paraplegia.7

Citation

Dessen P

SPTAN1 (spectrin alpha, non-erythrocytic 1)

Atlas Genet Cytogenet Oncol Haematol. 2009-05-01

Online version: http://atlasgeneticsoncology.org/gene/50896/sptan1-(spectrin-alpha-non-erythrocytic-1)