AMBN (ameloblastin (enamel matrix protein))
2011-12-01 Marina Gonçalves Diniz  , Ricardo Santiago Gomez  , Carolina Cavalieri Gomes  , André Luiz Sena Guimarães   AffiliationDNA/RNA
Note
The putative start codon location and exon-intron sizes differs among reports in literature.

The genomic organization of the human ameloblastin gene according to Mardh et al., 2001. The map is drawn to scale. Filled boxes represent exons and the thin lines indicate introns. Sequencing of AMBN intron 11 revealed an interrupted dinucleotide repeat (CA)n.
Description
13 exons and 12 introns (Toyosawa et al., 2000; Macdougall et al., 2000) encompassing approximately 15005 bp. Until 2011, 44 SNP were described (NCBI dbSNP).
Transcription
Alternatively spliced. Exon 6 can be excluded by the use of an alternative splice site (Macdougall et al., 2000). There are 2 validated alternative polyadenylation sites.
Proteins
Description
The predicted protein has 447 aa (48,3 kDa). There are 3 protein isoforms. The human precursor protein contains a phosphorylation site for tyrosine kinase, a SH3 binding region, an O-linked glycosylation, and a heparin binding domain (Kobayashi et al., 2007; Krebsbach et al., 1996; Yamakoshi et al., 2001; Sonoda et al., 2009). Ameloblastin is cleaved after secretion into several lower-molecular-mass proteins that are developmentally expressed (Ravindranath et al., 2007).
Expression
Tomes processes of secretory ameloblasts (Krebsbach et al., 1996; Cerny et al., 1996; Fong et al., 1996), odontoblasts and pre-odontoblasts (Fong et al., 1996; Nagano et al., 2003). Outer enamel, and sheath space between rod and interrod enamel (Uchida et al., 1995; Macdougall et al., 2000). Early bone and cartilage extracellular matrices during embryogenesis (Spahr et al., 2006).
Localisation
Extracellular matrix.
Function
Tooth enamel biomineralization (Uchida et al., 1997). Interactions between the ameloblasts and the enamel extracellular matrix (Fukumoto et al., 2004). Dental epithelium cell adhesion (Sonoda et al., 2009). Early bone formation and repair (Iizuza et al., 2011; Tamburstuen et al., 2011).
Homology
Pig (sheathlin), cattle, rat, and mouse AMBN sequences showed a high amino acid sequence similarity.
Mutations
Somatic
AMBN gene mutations have been observed in several epithelial odontogenic tumor entities: unicystic ameloblastoma, solid ameloblastoma, adenomatoid odontogenic tumor, squamous odontogenic tumor, and calcifying epithelial odontogenic tumor (Toyosawa et al., 2000; Perdigão et al., 2004; Perdigão et al., 2009).
Implicated in
Entity name
Odontogenic tumors
Disease
Odontogenic tumours arise from the residues of odontogenic epithelium and/or ectomesenchyme, as a result of disturbances in the development of teeth and associated structures.
Oncogenesis
AMBN gene is mutated in ameloblastomas and others odontogenic tumors (Toyosawa et al., 2000; Perdigão et al., 2004; Perdigão et al., 2009). Ambn-null mice develop odontogenic tumors of dental epithelium origin (Fukumoto et al., 2004). AMBN expression prevents odontogenic tumor development by suppressing cell proliferation and maintaining differentiation phenotype through Msx2, p21, and p27 (Sonoda et al., 2009). The absence of ameloblastin in epithelial odontogenic tumors has been considered a useful marker for the functional differentiation of secretory ameloblast (Takata et al., 2000).
Entity name
Amelogenesis imperfecta
Disease
Amelogenesis imperfect is a common group of inherited defects such as hypoplastic or hypomineralized enamel. Autosomal dominant, autosomal recessive, and X-linked forms of amelogenesis imperfect are recognized.
Oncogenesis
Amelogenin and ameloblastin have an impaired secretion in ameloblasts of phenocopies human X-linked amelogenesis imperfect mice, which results in severe enamel bio-mineralization defects, loss of ameloblast phenotype, increased ameloblast apoptosis, and formation of multi-cellular masses (Barron et al., 2010). AMBN mutations in the coding region or splice sites were discarted to be responsible for autosomal dominant amelogenesis imperfecta (Mardh et al., 2001).
Article Bibliography
| Pubmed ID | Last Year | Title | Authors |
|---|---|---|---|
| 20067920 | 2010 | A mutation in the mouse Amelx tri-tyrosyl domain results in impaired secretion of amelogenin and phenocopies human X-linked amelogenesis imperfecta. | Barron MJ et al |
| 8797107 | 1996 | A novel gene expressed in rat ameloblasts codes for proteins with cell binding domains. | Cerný R et al |
| 8797108 | 1996 | Amelin: an enamel-related protein, transcribed in the cells of epithelial root sheath. | Fong CD et al |
| 15583034 | 2004 | Ameloblastin is a cell adhesion molecule required for maintaining the differentiation state of ameloblasts. | Fukumoto S et al |
| 21149578 | 2011 | Ameloblastin regulates osteogenic differentiation by inhibiting Src kinase via cross talk between integrin beta1 and CD63. | Iizuka S et al |
| 17890672 | 2007 | Splicing determines the glycosylation state of ameloblastin. | Kobayashi K et al |
| 8626794 | 1996 | Full-length sequence, localization, and chromosomal mapping of ameloblastin. A novel tooth-specific gene. | Krebsbach PH et al |
| 10946765 | 2000 | Cloning, characterization and immunolocalization of human ameloblastin. | MacDougall M et al |
| 11330937 | 2001 | Human ameloblastin gene: genomic organization and mutation analysis in amelogenesis imperfecta patients. | Mårdh CK et al |
| 14630899 | 2003 | Relative levels of mRNA encoding enamel proteins in enamel organ epithelia and odontoblasts. | Nagano T et al |
| 19661317 | 2009 | Mutation of ameloblastin gene in calcifying epithelial odontogenic tumor. | Perdigão PF et al |
| 17921454 | 2007 | Spatiotemporal expression of ameloblastin isoforms during murine tooth development. | Ravindranath RM et al |
| 19648121 | 2009 | Critical role of heparin binding domains of ameloblastin for dental epithelium cell adhesion and ameloblastoma proliferation. | Sonoda A et al |
| 17184233 | 2006 | Ameloblastin expression during craniofacial bone formation in rats. | Spahr A et al |
| 10834534 | 2000 | Immunohistochemical demonstration of an enamel sheath protein, sheathlin, in odontogenic tumors. | Takata T et al |
| 20854943 | 2011 | Ameloblastin expression and putative autoregulation in mesenchymal cells suggest a role in early bone formation and repair. | Tamburstuen MV et al |
| 11054529 | 2000 | Cloning and characterization of the human ameloblastin gene. | Toyosawa S et al |
| 9313795 | 1997 | Synthesis, secretion, degradation, and fate of ameloblastin during the matrix formation stage of the rat incisor as shown by immunocytochemistry and immunochemistry using region-specific antibodies. | Uchida T et al |
| 11543707 | 2001 | Calcium binding of enamel proteins and their derivatives with emphasis on the calcium-binding domain of porcine sheathlin. | Yamakoshi Y et al |
Other Information
Locus ID:
NCBI: 258
MIM: 601259
HGNC: 452
Ensembl: ENSG00000178522
Variants:
dbSNP: 258
ClinVar: 258
TCGA: ENSG00000178522
COSMIC: AMBN
RNA/Proteins
| Gene ID | Transcript ID | Uniprot |
|---|---|---|
| ENSG00000178522 | ENST00000322937 | Q9NP70 |
| ENSG00000178522 | ENST00000322937 | Q546D7 |
| ENSG00000178522 | ENST00000449493 | Q9NP70 |
| ENSG00000178522 | ENST00000613447 | A0A087WV21 |
Expression (GTEx)
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 38058155 | 2024 | Novel Ameloblastin Variants, Contrasting Amelogenesis Imperfecta Phenotypes. | 1 |
| 38058155 | 2024 | Novel Ameloblastin Variants, Contrasting Amelogenesis Imperfecta Phenotypes. | 1 |
| 31402633 | 2019 | AMBN mutations causing hypoplastic amelogenesis imperfecta and Ambn knockout-NLS-lacZ knockin mice exhibiting failed amelogenesis and Ambn tissue-specificity. | 17 |
| 31402633 | 2019 | AMBN mutations causing hypoplastic amelogenesis imperfecta and Ambn knockout-NLS-lacZ knockin mice exhibiting failed amelogenesis and Ambn tissue-specificity. | 17 |
| 28382465 | 2018 | Significance of genetic variations in developmental enamel defects of primary dentition in Polish children. | 7 |
| 28382465 | 2018 | Significance of genetic variations in developmental enamel defects of primary dentition in Polish children. | 7 |
| 28295583 | 2017 | Ameloblastin Upregulates Inflammatory Response Through Induction of IL-1β in Human Macrophages. | 2 |
| 28395292 | 2017 | Genes Involved in the Enamel Development Are Associated with Calcium and Phosphorus Level in Saliva. | 5 |
| 28295583 | 2017 | Ameloblastin Upregulates Inflammatory Response Through Induction of IL-1β in Human Macrophages. | 2 |
| 28395292 | 2017 | Genes Involved in the Enamel Development Are Associated with Calcium and Phosphorus Level in Saliva. | 5 |
| 25373699 | 2015 | Effects of enamel matrix genes on dental caries are moderated by fluoride exposures. | 17 |
| 26070558 | 2015 | Protein Interaction between Ameloblastin and Proteasome Subunit α Type 3 Can Facilitate Redistribution of Ameloblastin Domains within Forming Enamel. | 5 |
| 26223266 | 2015 | Evolutionary analysis of selective constraints identifies ameloblastin (AMBN) as a potential candidate for amelogenesis imperfecta. | 20 |
| 25373699 | 2015 | Effects of enamel matrix genes on dental caries are moderated by fluoride exposures. | 17 |
| 26070558 | 2015 | Protein Interaction between Ameloblastin and Proteasome Subunit α Type 3 Can Facilitate Redistribution of Ameloblastin Domains within Forming Enamel. | 5 |
Citation
Marina Gonçalves Diniz ; Ricardo Santiago Gomez ; Carolina Cavalieri Gomes ; André Luiz Sena Guimarães
AMBN (ameloblastin (enamel matrix protein))
Atlas Genet Cytogenet Oncol Haematol. 2011-12-01
Online version: http://atlasgeneticsoncology.org/gene/51161
