PRRC2C (proline rich coiled-coil 2C)

2010-12-01  

Identity

HGNC
PRRC2C
LOCATION
1q24.3
LOCUSID
23215
ALIAS
BAT2-iso,BAT2D1,BAT2L2,XTP2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 23215
MIM: 617373
HGNC: 24903
Ensembl: ENSG00000117523

Variants:

dbSNP: 23215
ClinVar: 23215
TCGA: ENSG00000117523
COSMIC: PRRC2C

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000117523ENST00000338920Q9Y520
ENSG00000117523ENST00000367742E7EPN9
ENSG00000117523ENST00000392078A0A0A0MS30
ENSG00000117523ENST00000426496Q9Y520
ENSG00000117523ENST00000495585H7C5N8
ENSG00000117523ENST00000498596A0A2R8Y424
ENSG00000117523ENST00000644916A0A2R8Y7F4
ENSG00000117523ENST00000647382A0A2R8YET2

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
157477762003Dose-dependent transcriptome changes by metal ores on a human acute lymphoblastic leukemia cell line.3
157477762003Dose-dependent transcriptome changes by metal ores on a human acute lymphoblastic leukemia cell line.3
124435402002KIAA1096, a gene on chromosome 1q, is amplified and overexpressed in bladder cancer.7
124435402002KIAA1096, a gene on chromosome 1q, is amplified and overexpressed in bladder cancer.7

Citation

Dessen P

PRRC2C (proline rich coiled-coil 2C)

Atlas Genet Cytogenet Oncol Haematol. 2010-12-01

Online version: http://atlasgeneticsoncology.org/gene/51834/prrc2c-(proline-rich-coiled-coil-2c)