RAB39A (RAB39A, member RAS oncogene family)

2011-11-01  

Identity

HGNC
LOCATION
11q22.3
LOCUSID
ALIAS
RAB39
FUSION GENES

Other Information

Locus ID:

NCBI: 54734
HGNC: 16521
Ensembl: ENSG00000179331

Variants:

dbSNP: 54734
ClinVar: 54734
TCGA: ENSG00000179331
COSMIC: RAB39A

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000179331ENST00000320578Q14964

Expression (GTEx)

0
1
2
3

Pathways

PathwaySourceExternal ID
Metabolism of proteinsREACTOMER-HSA-392499
Post-translational protein modificationREACTOMER-HSA-597592
Vesicle-mediated transportREACTOMER-HSA-5653656
Membrane TraffickingREACTOMER-HSA-199991
Intra-Golgi and retrograde Golgi-to-ER trafficREACTOMER-HSA-6811442
Intra-Golgi trafficREACTOMER-HSA-6811438
RAB GEFs exchange GTP for GDP on RABsREACTOMER-HSA-8876198
RAB geranylgeranylationREACTOMER-HSA-8873719

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
296486082018RAB39A: a Rab small GTPase with a prominent role in cancer stemness.4
296486082018RAB39A: a Rab small GTPase with a prominent role in cancer stemness.4
274944562017C9ORF72 is a GDP/GTP exchange factor for Rab8 and Rab39 and regulates autophagy.37
274944562017C9ORF72 is a GDP/GTP exchange factor for Rab8 and Rab39 and regulates autophagy.37
261634922015The late endocytic Rab39a GTPase regulates the interaction between multivesicular bodies and chlamydial inclusions.25
261634922015The late endocytic Rab39a GTPase regulates the interaction between multivesicular bodies and chlamydial inclusions.25
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
198337222009Rab39a binds caspase-1 and is required for caspase-1-dependent interleukin-1beta secretion.23
198337222009Rab39a binds caspase-1 and is required for caspase-1-dependent interleukin-1beta secretion.23

Citation

Dessen P

RAB39A (RAB39A, member RAS oncogene family)

Atlas Genet Cytogenet Oncol Haematol. 2011-11-01

Online version: http://atlasgeneticsoncology.org/gene/52497/rab39a-(rab39a-member-ras-oncogene-family)