ALKBH3 (alkB homolog 3, alpha-ketoglutarate dependent dioxygenase)

2012-12-01  

Identity

HGNC
LOCATION
11p11.2
LOCUSID
ALIAS
ABH3,DEPC-1,DEPC1,PCA1,hABH3
FUSION GENES

Other Information

Locus ID:

NCBI: 221120
MIM: 610603
HGNC: 30141
Ensembl: ENSG00000166199

Variants:

dbSNP: 221120
ClinVar: 221120
TCGA: ENSG00000166199
COSMIC: ALKBH3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000166199ENST00000302708Q96Q83
ENSG00000166199ENST00000524742E9PRD0
ENSG00000166199ENST00000529366E9PSA5
ENSG00000166199ENST00000530803Q96Q83
ENSG00000166199ENST00000532129H0YDH4
ENSG00000166199ENST00000532962E9PN35
ENSG00000166199ENST00000534171E9PRJ2

Expression (GTEx)

0
5
10
15
20
25
30
35

Pathways

PathwaySourceExternal ID
DNA RepairREACTOMER-HSA-73894
DNA Damage ReversalREACTOMER-HSA-73942
Reversal of alkylation damage by DNA dioxygenasesREACTOMER-HSA-73943
ALKBH3 mediated reversal of alkylation damageREACTOMER-HSA-112126

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
381180022024Histone lactylation-boosted ALKBH3 potentiates tumor progression and diminished promyelocytic leukemia protein nuclear condensates by m1A demethylation of SP100A.2
381583832024The Molecular Basis of Human ALKBH3 Mediated RNA N(1) -methyladenosine (m(1) A) Demethylation.1
382562172024The Role of Key Amino Acids of the Human Fe(II)/2OG-Dependent Dioxygenase ALKBH3 in Structural Dynamics and Repair Activity toward Methylated DNA.0
381180022024Histone lactylation-boosted ALKBH3 potentiates tumor progression and diminished promyelocytic leukemia protein nuclear condensates by m1A demethylation of SP100A.2
381583832024The Molecular Basis of Human ALKBH3 Mediated RNA N(1) -methyladenosine (m(1) A) Demethylation.1
382562172024The Role of Key Amino Acids of the Human Fe(II)/2OG-Dependent Dioxygenase ALKBH3 in Structural Dynamics and Repair Activity toward Methylated DNA.0
360982052022LncRNA ALKBH3-AS1 enhances ALKBH3 mRNA stability to promote hepatocellular carcinoma cell proliferation and invasion.5
360982052022LncRNA ALKBH3-AS1 enhances ALKBH3 mRNA stability to promote hepatocellular carcinoma cell proliferation and invasion.5
329159562021Epigenetic loss of m1A RNA demethylase ALKBH3 in Hodgkin lymphoma targets collagen, conferring poor clinical outcome.22
340818272021Programmable RNA N(1) -Methyladenosine Demethylation by a Cas13d-Directed Demethylase.14
342173092021ALKBH3 partner ASCC3 mediates P-body formation and selective clearance of MMS-induced 1-methyladenosine and 3-methylcytosine from mRNA.10
329159562021Epigenetic loss of m1A RNA demethylase ALKBH3 in Hodgkin lymphoma targets collagen, conferring poor clinical outcome.22
340818272021Programmable RNA N(1) -Methyladenosine Demethylation by a Cas13d-Directed Demethylase.14
342173092021ALKBH3 partner ASCC3 mediates P-body formation and selective clearance of MMS-induced 1-methyladenosine and 3-methylcytosine from mRNA.10
303421762019Human ALKBH3-induced m(1)A demethylation increases the CSF-1 mRNA stability in breast and ovarian cancer cells.69

Citation

Dessen P

ALKBH3 (alkB homolog 3, alpha-ketoglutarate dependent dioxygenase)

Atlas Genet Cytogenet Oncol Haematol. 2012-12-01

Online version: http://atlasgeneticsoncology.org/gene/53106/alkbh3-(alkb-homolog-3-alpha-ketoglutarate-dependent-dioxygenase)