CCSER1 (coiled-coil serine rich protein 1)

2013-11-01  

Identity

HGNC
CCSER1
LOCATION
4q22.1
LOCUSID
401145
ALIAS
FAM190A
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 401145
MIM: 618934
HGNC: 29349
Ensembl: ENSG00000184305

Variants:

dbSNP: 401145
ClinVar: 401145
TCGA: ENSG00000184305
COSMIC: CCSER1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000184305ENST00000432775Q9C0I3
ENSG00000184305ENST00000502478H0YAI2
ENSG00000184305ENST00000503421D6RAM6
ENSG00000184305ENST00000505073E7EUW0
ENSG00000184305ENST00000508550H0YA74
ENSG00000184305ENST00000509109D6RAM2
ENSG00000184305ENST00000509176Q9C0I3
ENSG00000184305ENST00000510519D6RB70
ENSG00000184305ENST00000513522H0Y9F8
ENSG00000184305ENST00000649522A0A3B3ITL2

Expression (GTEx)

0
1
2
3
4
5
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
206077902010Analysis of GWAS top hits in ADHD suggests association to two polymorphisms located in genes expressed in the cerebellum.12
236652032013FAM190A deficiency creates a cell division defect.0

Citation

Dessen P

CCSER1 (coiled-coil serine rich protein 1)

Atlas Genet Cytogenet Oncol Haematol. 2013-11-01

Online version: http://atlasgeneticsoncology.org/gene/53543/ccser1-(coiled-coil-serine-rich-protein-1)