FCN2 (ficolin 2)

2013-11-01  

Identity

HGNC
LOCATION
9q34.3
LOCUSID
ALIAS
EBP-37,FCNL,P35,ficolin-2

Other Information

Locus ID:

NCBI: 2220
MIM: 601624
HGNC: 3624
Ensembl: ENSG00000160339

Variants:

dbSNP: 2220
ClinVar: 2220
TCGA: ENSG00000160339
COSMIC: FCN2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000160339ENST00000291744Q15485
ENSG00000160339ENST00000350339Q15485

Expression (GTEx)

0
5
10
15
20
25
30
35
40

Pathways

PathwaySourceExternal ID
Immune SystemREACTOMER-HSA-168256
Innate Immune SystemREACTOMER-HSA-168249
Complement cascadeREACTOMER-HSA-166658
Initial triggering of complementREACTOMER-HSA-166663
Creation of C4 and C2 activatorsREACTOMER-HSA-166786
Lectin pathway of complement activationREACTOMER-HSA-166662
Ficolins bind to repetitive carbohydrate structures on the target cell surfaceREACTOMER-HSA-2855086

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA10066duloxetineChemicalClinicalAnnotation, VariantAnnotationassociatedPD29407288
PA447321Depressive Disorder, MajorDiseaseClinicalAnnotation, VariantAnnotationassociatedPD29407288

References

Pubmed IDYearTitleCitations
368058572023l-ficolin-MASP arm of the complement system in schizophrenia.1
368331692023Selected SNPs of FCN2 Associated with Chronic Tonsillitis in the Polish Adult Population.0
380331682023Variants of IL6, IL10, FCN2, RNASE3, IL12B and IL17B loci are associated with Schistosoma mansoni worm burden in the Albert Nile region of Uganda.0
368058572023l-ficolin-MASP arm of the complement system in schizophrenia.1
368331692023Selected SNPs of FCN2 Associated with Chronic Tonsillitis in the Polish Adult Population.0
380331682023Variants of IL6, IL10, FCN2, RNASE3, IL12B and IL17B loci are associated with Schistosoma mansoni worm burden in the Albert Nile region of Uganda.0
352699552022Ficolin-2 Plasma Level Assesses Liver Fibrosis in Non-Alcoholic Fatty Liver Disease.1
354189832022Ficolin-2 Lectin Complement Pathway Mediates Capsule-Specific Innate Immunity Against Invasive Pneumococcal Disease.2
364996632022Association of the FCN2 Gene Promoter Region Polymorphisms with Very Low Birthweight in Preterm Neonates.3
352699552022Ficolin-2 Plasma Level Assesses Liver Fibrosis in Non-Alcoholic Fatty Liver Disease.1
354189832022Ficolin-2 Lectin Complement Pathway Mediates Capsule-Specific Innate Immunity Against Invasive Pneumococcal Disease.2
364996632022Association of the FCN2 Gene Promoter Region Polymorphisms with Very Low Birthweight in Preterm Neonates.3
335133542021Ficolin-2 serum levels predict the occurrence of acute coronary syndrome in patients with severe carotid artery stenosis.6
345295172021Novel FCN2 Variants and Haplotypes are Associated with Rheumatic Heart Disease.1
335133542021Ficolin-2 serum levels predict the occurrence of acute coronary syndrome in patients with severe carotid artery stenosis.6

Citation

Dessen P

FCN2 (ficolin 2)

Atlas Genet Cytogenet Oncol Haematol. 2013-11-01

Online version: http://atlasgeneticsoncology.org/gene/53615/fcn2-(ficolin-2)