CCDC30 (coiled-coil domain containing 30)

2014-08-01  

Identity

HGNC
CCDC30
LOCATION
1p34.2
LOCUSID
728621
ALIAS
PFD6L,PFDN6L
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 728621
HGNC: 26103
Ensembl: ENSG00000186409

Variants:

dbSNP: 728621
ClinVar: 728621
TCGA: ENSG00000186409
COSMIC: CCDC30

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000186409ENST00000340612A0A2U3TZI4
ENSG00000186409ENST00000342022Q5VVM6
ENSG00000186409ENST00000428554Q5VVM6
ENSG00000186409ENST00000477155D6RFH8
ENSG00000186409ENST00000509712F6UBW0
ENSG00000186409ENST00000514642A0A590UJL6
ENSG00000186409ENST00000653735A0A590UK05
ENSG00000186409ENST00000654604A0A590UK35
ENSG00000186409ENST00000654683A0A590UJL9
ENSG00000186409ENST00000655164A0A590UKA6
ENSG00000186409ENST00000655447A0A590UJL9
ENSG00000186409ENST00000655845A0A590UJL9
ENSG00000186409ENST00000656470A0A590UJK6
ENSG00000186409ENST00000657597A0A590UK19
ENSG00000186409ENST00000658812A0A590UJ69
ENSG00000186409ENST00000660083A0A590UJA8
ENSG00000186409ENST00000660938A0A590UJ28
ENSG00000186409ENST00000661864A0A590UJI4
ENSG00000186409ENST00000663866A0A590UJ83
ENSG00000186409ENST00000664192A0A590UJ69
ENSG00000186409ENST00000664418D6RFH8
ENSG00000186409ENST00000664805A0A590UJA8
ENSG00000186409ENST00000665176A0A590UJC1
ENSG00000186409ENST00000665812A0A590UKA3
ENSG00000186409ENST00000666893A0A590UJQ0
ENSG00000186409ENST00000667205A0A590UJA8
ENSG00000186409ENST00000667947A0A590UJ34
ENSG00000186409ENST00000668036A0A590UJC6
ENSG00000186409ENST00000668663A0A590UJA8
ENSG00000186409ENST00000669138A0A590UJW7
ENSG00000186409ENST00000670292A0A590UJL9
ENSG00000186409ENST00000670783A0A590UJ69
ENSG00000186409ENST00000670982A0A590UJ77
ENSG00000186409ENST00000671281A0A590UKA6
ENSG00000186409ENST00000671538A0A590UJ92

Expression (GTEx)

0
1
2
3
4
5
6
7
8
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
167107672006Cloning and characterization of a novel human prefoldin and SPEC domain protein gene (PFD6L) from the fetal brain.2
167107672006Cloning and characterization of a novel human prefoldin and SPEC domain protein gene (PFD6L) from the fetal brain.2

Citation

Dessen P

CCDC30 (coiled-coil domain containing 30)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54196/ccdc30-(coiled-coil-domain-containing-30)