CPNE4 (copine 4)

2014-08-01  

Identity

HGNC
CPNE4
LOCATION
3q22.1
LOCUSID
131034
ALIAS
COPN4,CPN4
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 131034
MIM: 604208
HGNC: 2317
Ensembl: ENSG00000196353

Variants:

dbSNP: 131034
ClinVar: 131034
TCGA: ENSG00000196353
COSMIC: CPNE4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000196353ENST00000429747Q96A23
ENSG00000196353ENST00000502818Q96A23
ENSG00000196353ENST00000505881D6RCT2
ENSG00000196353ENST00000505957D6RFY4
ENSG00000196353ENST00000511604Q96A23
ENSG00000196353ENST00000512055Q96A23
ENSG00000196353ENST00000512332Q96A23
ENSG00000196353ENST00000514999D6RI99
ENSG00000196353ENST00000617767Q96A23

Expression (GTEx)

0
5
10
15
20
25
30
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
adrenal gland
nasopharynx
bronchus
lung
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
126704872003Cloning, molecular characterization, and expression analysis of Copine 8.11
253281212015Associations between Genetic Variants and Angiographic Characteristics in Patients with Coronary Artery Disease.4

Citation

Dessen P

CPNE4 (copine 4)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54233/cpne4-(copine-4)