GAPVD1 (GTPase activating protein and VPS9 domains 1)

2014-08-01  

Identity

HGNC
LOCATION
9q33.3
LOCUSID
ALIAS
GAPEX5,GAPex-5,RAP6
FUSION GENES

Other Information

Locus ID:

NCBI: 26130
MIM: 611714
HGNC: 23375
Ensembl: ENSG00000165219

Variants:

dbSNP: 26130
ClinVar: 26130
TCGA: ENSG00000165219
COSMIC: GAPVD1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000165219ENST00000265956A0A0A0MQV8
ENSG00000165219ENST00000297933Q14C86
ENSG00000165219ENST00000297933A0A024R862
ENSG00000165219ENST00000312123Q14C86
ENSG00000165219ENST00000394083F8W9S7
ENSG00000165219ENST00000394084B0QZ65
ENSG00000165219ENST00000394104Q14C86
ENSG00000165219ENST00000394105Q14C86
ENSG00000165219ENST00000394105A0A024R8A2
ENSG00000165219ENST00000431329H0Y7I9
ENSG00000165219ENST00000436712H0Y4E7
ENSG00000165219ENST00000461379C9IZX9
ENSG00000165219ENST00000467750C9IZ08
ENSG00000165219ENST00000470056Q14C86
ENSG00000165219ENST00000470056A0A024R875
ENSG00000165219ENST00000495955Q14C86
ENSG00000165219ENST00000497580B4DGD8

Expression (GTEx)

0
5
10
15
20

Pathways

PathwaySourceExternal ID
Vesicle-mediated transportREACTOMER-HSA-5653656
Membrane TraffickingREACTOMER-HSA-199991
Clathrin-mediated endocytosisREACTOMER-HSA-8856828
RAB GEFs exchange GTP for GDP on RABsREACTOMER-HSA-8876198

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA444987Multiple SclerosisDiseaseClinicalAnnotationassociatedPD27001119
PA450037interferon beta-1aChemicalClinicalAnnotationassociatedPD27001119
PA450039interferon beta-1bChemicalClinicalAnnotationassociatedPD27001119

References

Pubmed IDYearTitleCitations
335486182021An interdependence between GAPVD1 gene polymorphism, expression level and response to interferon beta in patients with multiple sclerosis.0
339174942021Phosphorylation of GAPVD1 Is Regulated by the PER Complex and Linked to GAPVD1 Degradation.0
335486182021An interdependence between GAPVD1 gene polymorphism, expression level and response to interferon beta in patients with multiple sclerosis.0
339174942021Phosphorylation of GAPVD1 Is Regulated by the PER Complex and Linked to GAPVD1 Degradation.0
323219362020CRISPR-mediated gene targeting of CK1δ/ε leads to enhanced understanding of their role in endocytosis via phosphoregulation of GAPVD1.5
323219362020CRISPR-mediated gene targeting of CK1δ/ε leads to enhanced understanding of their role in endocytosis via phosphoregulation of GAPVD1.5
313587362019SPIN90, an adaptor protein, alters the proximity between Rab5 and Gapex5 and facilitates Rab5 activation during EGF endocytosis.5
313587362019SPIN90, an adaptor protein, alters the proximity between Rab5 and Gapex5 and facilitates Rab5 activation during EGF endocytosis.5
175451482007GAPex-5 mediates ubiquitination, trafficking, and degradation of epidermal growth factor receptor.20
175451482007GAPex-5 mediates ubiquitination, trafficking, and degradation of epidermal growth factor receptor.20

Citation

Dessen P

GAPVD1 (GTPase activating protein and VPS9 domains 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54323/gapvd1-(gtpase-activating-protein-and-vps9-domains-1)