LETM2 (leucine zipper and EF-hand containing transmembrane protein 2)

2014-08-01  

Identity

HGNC
LETM2
LOCATION
8p11.23
LOCUSID
137994
ALIAS
SLC55A2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 137994
HGNC: 14648
Ensembl: ENSG00000165046

Variants:

dbSNP: 137994
ClinVar: 137994
TCGA: ENSG00000165046
COSMIC: LETM2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000165046ENST00000297720Q2VYF4
ENSG00000165046ENST00000379957Q2VYF4
ENSG00000165046ENST00000518883E5RJN4
ENSG00000165046ENST00000519476A8K1M9
ENSG00000165046ENST00000523268E5RK40
ENSG00000165046ENST00000523983Q2VYF4
ENSG00000165046ENST00000524874E9PMA4
ENSG00000165046ENST00000526356E9PN52
ENSG00000165046ENST00000527175H0YCZ8
ENSG00000165046ENST00000527334E9PIC7
ENSG00000165046ENST00000527710Q2VYF4

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

LETM2 (leucine zipper and EF-hand containing transmembrane protein 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54423/letm2-(leucine-zipper-and-ef-hand-containing-transmembrane-protein-2)