SFTPB (surfactant protein B)

2014-08-01  

Identity

HGNC
LOCATION
2p11.2
LOCUSID
ALIAS
PSP-B,SFTB3,SFTP3,SMDP1,SP-B
FUSION GENES

Other Information

Locus ID:

NCBI: 6439
MIM: 178640
HGNC: 10801
Ensembl: ENSG00000168878

Variants:

dbSNP: 6439
ClinVar: 6439
TCGA: ENSG00000168878
COSMIC: SFTPB

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000168878ENST00000393822P07988
ENSG00000168878ENST00000409383P07988
ENSG00000168878ENST00000409383D6W5L6
ENSG00000168878ENST00000428225H0Y7V6
ENSG00000168878ENST00000494165U3KQT2
ENSG00000168878ENST00000519937P07988

Expression (GTEx)

0
500
1000
1500
2000
2500
3000
3500

Pathways

PathwaySourceExternal ID
Metabolism of proteinsREACTOMER-HSA-392499
DiseaseREACTOMER-HSA-1643685
Disorders of transmembrane transportersREACTOMER-HSA-5619115
ABC transporter disordersREACTOMER-HSA-5619084
Diseases of metabolismREACTOMER-HSA-5668914
Diseases associated with surfactant metabolismREACTOMER-HSA-5687613
Defective pro-SFTPB causes pulmonary surfactant metabolism dysfunction 1 (SMDP1) and respiratory distress syndrome (RDS)REACTOMER-HSA-5688031
Defective pro-SFTPC causes pulmonary surfactant metabolism dysfunction 2 (SMDP2) and respiratory distress syndrome (RDS)REACTOMER-HSA-5688354
Defective CSF2RA causes pulmonary surfactant metabolism dysfunction 4 (SMDP4)REACTOMER-HSA-5688890
Defective CSF2RB causes pulmonary surfactant metabolism dysfunction 5 (SMDP5)REACTOMER-HSA-5688849
Surfactant metabolismREACTOMER-HSA-5683826
Defective ABCA3 causes pulmonary surfactant metabolism dysfunction type 3 (SMDP3)REACTOMER-HSA-5683678

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
364605832023SFTPB (rs11130866) and NR3C1 (rs41423247) gene variants as potential clinical biomarkers for personalized treatment strategy selection in patients with severe COVID-19 pneumonia.4
364605832023SFTPB (rs11130866) and NR3C1 (rs41423247) gene variants as potential clinical biomarkers for personalized treatment strategy selection in patients with severe COVID-19 pneumonia.4
351216582022A dominant negative variant of RAB5B disrupts maturation of surfactant protein B and surfactant protein C.5
353009832022Pulmonary surfactant protein B carried by HDL predicts incident CVD in patients with type 1 diabetes.5
356896532022Silica nanoparticle exposure inhibits surfactant protein A and B in A549 cells through ROS-mediated JNK/c-Jun signaling pathway.1
351216582022A dominant negative variant of RAB5B disrupts maturation of surfactant protein B and surfactant protein C.5
353009832022Pulmonary surfactant protein B carried by HDL predicts incident CVD in patients with type 1 diabetes.5
356896532022Silica nanoparticle exposure inhibits surfactant protein A and B in A549 cells through ROS-mediated JNK/c-Jun signaling pathway.1
337195632021A primate-specific RNA-binding protein (RBMXL3) is involved in glucocorticoid regulation of human pulmonary surfactant protein B (SP-B) mRNA stability.0
337296122021Pulmonary surfactant-associated protein B regulates prostaglandin-endoperoxide synthase-2 and inflammation in chronic obstructive pulmonary disease.2
342865052021Immunohistochemical findings in the lungs of COVID-19 subjects: evidence of surfactant dysregulation.5
337195632021A primate-specific RNA-binding protein (RBMXL3) is involved in glucocorticoid regulation of human pulmonary surfactant protein B (SP-B) mRNA stability.0
337296122021Pulmonary surfactant-associated protein B regulates prostaglandin-endoperoxide synthase-2 and inflammation in chronic obstructive pulmonary disease.2
342865052021Immunohistochemical findings in the lungs of COVID-19 subjects: evidence of surfactant dysregulation.5
318511202020Regulatory Roles of Human Surfactant Protein B Variants on Genetic Susceptibility to Pseudomonas Aeruginosa Pneumonia-Induced Sepsis.8

Citation

Dessen P

SFTPB (surfactant protein B)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54615/submit-meetings/teaching-explorer/