WDPCP (WD repeat containing planar cell polarity effector)

2014-08-01  

Identity

HGNC
WDPCP
LOCATION
2p15
LOCUSID
51057
ALIAS
BBS15,C2orf86,CHDTHP,CPLANE5,FRITZ,FRTZ
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 51057
MIM: 613580
HGNC: 28027
Ensembl: ENSG00000143951

Variants:

dbSNP: 51057
ClinVar: 51057
TCGA: ENSG00000143951
COSMIC: WDPCP

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000143951ENST00000272321O95876
ENSG00000143951ENST00000398544O95876
ENSG00000143951ENST00000409120E9PFG9
ENSG00000143951ENST00000409199E9PFG9
ENSG00000143951ENST00000409354H7BZ13
ENSG00000143951ENST00000409562O95876
ENSG00000143951ENST00000417238F8WBT2
ENSG00000143951ENST00000418148H7C375
ENSG00000143951ENST00000431065C9JDS5
ENSG00000143951ENST00000473678A0A1D5RMS8

Expression (GTEx)

0
1
2
3
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
379964732023Evidence for involvement of the alcohol consumption WDPCP gene in lipid metabolism, and liver cirrhosis.0
379964732023Evidence for involvement of the alcohol consumption WDPCP gene in lipid metabolism, and liver cirrhosis.0
280013382017WDPCP regulates the ciliogenesis of human sinonasal epithelial cells in chronic rhinosinusitis.5
280013382017WDPCP regulates the ciliogenesis of human sinonasal epithelial cells in chronic rhinosinusitis.5
206280862010Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.15
206711532010Planar cell polarity acts through septins to control collective cell movement and ciliogenesis.186
206280862010Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.15
206711532010Planar cell polarity acts through septins to control collective cell movement and ciliogenesis.186
199131212009Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.105
199131212009Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.105

Citation

Dessen P

WDPCP (WD repeat containing planar cell polarity effector)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54774/wdpcp-(wd-repeat-containing-planar-cell-polarity-effector)