SETD1B (SET domain containing 1B, histone lysine methyltransferase)

2014-10-01  

Identity

HGNC
LOCATION
12q24.31
LOCUSID
ALIAS
IDDSELD,KMT2G,Set1B
FUSION GENES

Other Information

Locus ID:

NCBI: 23067
MIM: 611055
HGNC: 29187
Ensembl: ENSG00000139718

Variants:

dbSNP: 23067
ClinVar: 23067
TCGA: ENSG00000139718
COSMIC: SETD1B

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000139718ENST00000267197A0A0A0MQV9
ENSG00000139718ENST00000542440Q9UPS6
ENSG00000139718ENST00000604567Q9UPS6
ENSG00000139718ENST00000619791Q9UPS6

Expression (GTEx)

0
10
20
30
40
50
60
70

Pathways

PathwaySourceExternal ID
Lysine degradationKEGGko00310
Lysine degradationKEGGhsa00310
Chromatin organizationREACTOMER-HSA-4839726
Chromatin modifying enzymesREACTOMER-HSA-3247509
PKMTs methylate histone lysinesREACTOMER-HSA-3214841

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
380487162024Phenotypic spectrum of SETD1B-related disorder: Myoclonic absence seizures and concurrent intellectual disability - Insights from two cases.0
380487162024Phenotypic spectrum of SETD1B-related disorder: Myoclonic absence seizures and concurrent intellectual disability - Insights from two cases.0
370300682023Molecular insight into the SETD1A/B N-terminal region and its interaction with WDR82.1
370300682023Molecular insight into the SETD1A/B N-terminal region and its interaction with WDR82.1
325465662021SETD1B-associated neurodevelopmental disorder.14
343450252021Delineating the molecular and phenotypic spectrum of the SETD1B-related syndrome.9
325465662021SETD1B-associated neurodevelopmental disorder.14
343450252021Delineating the molecular and phenotypic spectrum of the SETD1B-related syndrome.9
306286962019High‑level SETD1B gene expression is associated with unfavorable prognosis in hepatocellular carcinoma.4
309771202019SET domain containing 1B gene is mutated in primary hepatic neuroendocrine tumors.5
311102342019A novel de novo frameshift variant in SETD1B causes epilepsy.5
316850132019A genome-wide DNA methylation signature for SETD1B-related syndrome.28
306286962019High‑level SETD1B gene expression is associated with unfavorable prognosis in hepatocellular carcinoma.4
309771202019SET domain containing 1B gene is mutated in primary hepatic neuroendocrine tumors.5
311102342019A novel de novo frameshift variant in SETD1B causes epilepsy.5

Citation

Dessen P

SETD1B (SET domain containing 1B, histone lysine methyltransferase)

Atlas Genet Cytogenet Oncol Haematol. 2014-10-01

Online version: http://atlasgeneticsoncology.org/gene/54906