ABCA10 (ATP binding cassette subfamily A member 10)

2015-08-01  

Identity

HGNC
ABCA10
LOCATION
17q24.3
LOCUSID
10349
ALIAS
EST698739
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 10349
MIM: 612508
HGNC: 30
Ensembl: ENSG00000154263

Variants:

dbSNP: 10349
ClinVar: 10349
TCGA: ENSG00000154263
COSMIC: ABCA10

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000154263ENST00000269081Q8WWZ4
ENSG00000154263ENST00000518929E5RFP5
ENSG00000154263ENST00000521538K7EMH5
ENSG00000154263ENST00000522406Q8WWZ4
ENSG00000154263ENST00000522787K7ERP5
ENSG00000154263ENST00000523419E5RFN6
ENSG00000154263ENST00000523512Q8WWZ4
ENSG00000154263ENST00000524273H0YBL8

Expression (GTEx)

0
10
20
30
40
50
60
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
ABC transportersKEGGko02010
ABC transportersKEGGhsa02010
Transmembrane transport of small moleculesREACTOMER-HSA-382551
ABC-family proteins mediated transportREACTOMER-HSA-382556
ABC transporters in lipid homeostasisREACTOMER-HSA-1369062

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
335792212021A 4-gene signature predicts prognosis of uterine serous carcinoma.5
335792212021A 4-gene signature predicts prognosis of uterine serous carcinoma.5
252941552014A comprehensive evaluation of the role of genetic variation in follicular lymphoma survival.10
252941552014A comprehensive evaluation of the role of genetic variation in follicular lymphoma survival.10
128211552003ABCA10, a novel cholesterol-regulated ABCA6-like ABC transporter.14
128211552003ABCA10, a novel cholesterol-regulated ABCA6-like ABC transporter.14

Citation

Dessen P

ABCA10 (ATP binding cassette subfamily A member 10)

Atlas Genet Cytogenet Oncol Haematol. 2015-08-01

Online version: http://atlasgeneticsoncology.org/gene/55371/abca10-(atp-binding-cassette-subfamily-a-member-10)