LINC00511 (long intergenic non-protein coding RNA 511)

2015-10-01 Affiliation

Identity

HGNC

LINC00511

LOCATION

17q24.3

LOCUSID

400619

ALIAS

LCAL5,onco-lncRNA-12

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 400619
HGNC: 43564
Ensembl: ENSG00000227036

Variants:

dbSNP: 400619
ClinVar: 400619
TCGA: ENSG00000227036
COSMIC: LINC00511

RNA/Proteins

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

References

Pubmed ID	Year	Title	Citations
28984028	2018	Linc00511 acts as a competing endogenous RNA to regulate VEGFA expression through sponging hsa-miR-29b-3p in pancreatic ductal adenocarcinoma.	27
29315846	2018	LINC00511 interacts with miR-765 and modulates tongue squamous cell carcinoma progression by targeting LAMC2.	24
25864709	2015	Pan-cancer transcriptome analysis reveals long noncoding RNAs with conserved function.	0
30042171	2018	Knockdown of long non-coding RNA linc00511 suppresses proliferation and promotes apoptosis of bladder cancer cells via suppressing Wnt/β-catenin signaling pathway.	0
30482236	2018	Long noncoding RNA LINC00511 contributes to breast cancer tumourigenesis and stemness by inducing the miR-185-3p/E2F1/Nanog axis.	0
31180057	2019	LINC00511 knockdown prevents cervical cancer cell proliferation and reduces resistance to paclitaxel.	0

Citation

Dessen P

LINC00511 (long intergenic non-protein coding RNA 511)

Atlas Genet Cytogenet Oncol Haematol. 2015-10-01

Online version: http://atlasgeneticsoncology.org/gene/55484/linc00511-(long-intergenic-non-protein-coding-rna-511)