COL15A1 (collagen type XV alpha 1 chain)

2016-03-01  

Identity

HGNC
LOCATION
9q22.33
LOCUSID
ALIAS
-
FUSION GENES

Other Information

Locus ID:

NCBI: 1306
MIM: 120325
HGNC: 2192
Ensembl: ENSG00000204291

Variants:

dbSNP: 1306
ClinVar: 1306
TCGA: ENSG00000204291
COSMIC: COL15A1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000204291ENST00000375001P39059
ENSG00000204291ENST00000610452A0A087X0K0

Expression (GTEx)

0
50
100
150

Pathways

PathwaySourceExternal ID
Protein digestion and absorptionKEGGko04974
Protein digestion and absorptionKEGGhsa04974
Extracellular matrix organizationREACTOMER-HSA-1474244
Collagen formationREACTOMER-HSA-1474290
Collagen biosynthesis and modifying enzymesREACTOMER-HSA-1650814
Assembly of collagen fibrils and other multimeric structuresREACTOMER-HSA-2022090
Degradation of the extracellular matrixREACTOMER-HSA-1474228
Collagen degradationREACTOMER-HSA-1442490
Collagen chain trimerizationREACTOMER-HSA-8948216

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
375520252023Alveolar Vascular Remodeling in Nonspecific Interstitial Pneumonia: Replacement of Normal Lung Capillaries with COL15A1-Positive Endothelial Cells.1
375520252023Alveolar Vascular Remodeling in Nonspecific Interstitial Pneumonia: Replacement of Normal Lung Capillaries with COL15A1-Positive Endothelial Cells.1
344047552021TGF-β2 and collagen play pivotal roles in the spheroid formation and anti-aging of human dermal papilla cells.2
344047552021TGF-β2 and collagen play pivotal roles in the spheroid formation and anti-aging of human dermal papilla cells.2
305377322018Hypoxia Preconditioning of Human MSCs: a Direct Evidence of HIF-1α and Collagen Type XV Correlation.14
305377322018Hypoxia Preconditioning of Human MSCs: a Direct Evidence of HIF-1α and Collagen Type XV Correlation.14
262933332016Human collagen XV is a prominent histopathological component of sinusoidal capillarization in hepatocellular carcinogenesis.9
269370072016Slow Muscle Precursors Lay Down a Collagen XV Matrix Fingerprint to Guide Motor Axon Navigation.18
262933332016Human collagen XV is a prominent histopathological component of sinusoidal capillarization in hepatocellular carcinogenesis.9
269370072016Slow Muscle Precursors Lay Down a Collagen XV Matrix Fingerprint to Guide Motor Axon Navigation.18
251345342014Genome-wide association study identifies new susceptibility loci for epithelial ovarian cancer in Han Chinese women.40
251345342014Genome-wide association study identifies new susceptibility loci for epithelial ovarian cancer in Han Chinese women.40
236219012013Variations in COL15A1 and COL18A1 influence age of onset of primary open angle glaucoma.14
239123402013Epigenetic regulation of COL15A1 in smooth muscle cell replicative aging and atherosclerosis.30
255098782013[The effects of simulated microgravity on the pattern of gene expression in human bone marrow mesenchymal stem cells under osteogenic differentiation].3

Citation

Dessen P

COL15A1 (collagen type XV alpha 1 chain)

Atlas Genet Cytogenet Oncol Haematol. 2016-03-01

Online version: http://atlasgeneticsoncology.org/gene/55683/col15a1-(collagen-type-xv-alpha-1-chain)