C6orf89 (chromosome 6 open reading frame 89)

2016-10-01  

Identity

HGNC
C6orf89
LOCATION
6p21.2
LOCUSID
221477
ALIAS
BRAP,PS1TP5TP1
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 221477
MIM: 616642
HGNC: 21114
Ensembl: ENSG00000198663

Variants:

dbSNP: 221477
ClinVar: 221477
TCGA: ENSG00000198663
COSMIC: C6orf89

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000198663ENST00000355190Q6UWU4
ENSG00000198663ENST00000359359Q6UWU4
ENSG00000198663ENST00000373685Q6UWU4
ENSG00000198663ENST00000373685A0A024RCY0
ENSG00000198663ENST00000480824Q6UWU4
ENSG00000198663ENST00000480824A0A024RCY0

Expression (GTEx)

0
10
20
30
40
50
60
70
80
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
284763092017Bombesin receptor-activated protein regulates neutrophil elastase-induced mucin5AC hypersecretion in human bronchial epithelial cells.4
284763092017Bombesin receptor-activated protein regulates neutrophil elastase-induced mucin5AC hypersecretion in human bronchial epithelial cells.4
264604872016Bombesin Receptor-Activated Protein (BRAP) Modulates NF-κB Activation in Bronchial Epithelial Cells by Enhancing HDAC Activity.4
264604872016Bombesin Receptor-Activated Protein (BRAP) Modulates NF-κB Activation in Bronchial Epithelial Cells by Enhancing HDAC Activity.4
229305882013Role of bombesin receptor activated protein in the antigen presentation by human bronchial epithelial cells.3
234603382013C6orf89 encodes three distinct HDAC enhancers that function in the nucleolus, the golgi and the midbody.6
234603382013C6orf89 encodes three distinct HDAC enhancers that function in the nucleolus, the golgi and the midbody.6
229305882013Role of bombesin receptor activated protein in the antigen presentation by human bronchial epithelial cells.3
234603382013C6orf89 encodes three distinct HDAC enhancers that function in the nucleolus, the golgi and the midbody.6
234603382013C6orf89 encodes three distinct HDAC enhancers that function in the nucleolus, the golgi and the midbody.6
218579952011Cloning of a novel protein interacting with BRS-3 and its effects in wound repair of bronchial epithelial cells.5
218579952011Cloning of a novel protein interacting with BRS-3 and its effects in wound repair of bronchial epithelial cells.5

Citation

Dessen P

C6orf89 (chromosome 6 open reading frame 89)

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/55991/c6orf89-(chromosome-6-open-reading-frame-89)