SEC22C (SEC22 homolog C, vesicle trafficking protein)

2016-10-01 Affiliation

Identity

HGNC

SEC22C

LOCATION

3p22.1

LOCUSID

9117

ALIAS

SEC22L3

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 9117
MIM: 604028
HGNC: 16828
Ensembl: ENSG00000093183

Variants:

dbSNP: 9117
ClinVar: 9117
TCGA: ENSG00000093183
COSMIC: SEC22C

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000093183	ENST00000264454	Q9BRL7
ENSG00000093183	ENST00000264454	A0A024R2N5
ENSG00000093183	ENST00000273156	Q9BRL7
ENSG00000093183	ENST00000273156	A0A024R2Q1
ENSG00000093183	ENST00000383750	F8VQT7
ENSG00000093183	ENST00000416880	C9J9A4
ENSG00000093183	ENST00000417572	Q9BRL7
ENSG00000093183	ENST00000417572	A0A024R2Q1
ENSG00000093183	ENST00000420163	C9JNW1
ENSG00000093183	ENST00000423701	Q9BRL7
ENSG00000093183	ENST00000445388	F8VQT7
ENSG00000093183	ENST00000449617	F8WDR5
ENSG00000093183	ENST00000450981	C9J2R1
ENSG00000093183	ENST00000451653	H7C479
ENSG00000093183	ENST00000454141	F8WBN1
ENSG00000093183	ENST00000456515	C9J448

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Metabolism of proteins	REACTOME	R-HSA-392499
Post-translational protein modification	REACTOME	R-HSA-597592
Asparagine N-linked glycosylation	REACTOME	R-HSA-446203
Transport to the Golgi and subsequent modification	REACTOME	R-HSA-948021
ER to Golgi Anterograde Transport	REACTOME	R-HSA-199977
COPII (Coat Protein 2) Mediated Vesicle Transport	REACTOME	R-HSA-204005
Vesicle-mediated transport	REACTOME	R-HSA-5653656
Membrane Trafficking	REACTOME	R-HSA-199991

References

Pubmed ID	Year	Title	Citations
28414125	2017	The number of the C-terminal transmembrane domains has the potency to specify subcellular localization of Sec22c.	2
28414125	2017	The number of the C-terminal transmembrane domains has the potency to specify subcellular localization of Sec22c.	2

Citation

Dessen P

SEC22C (SEC22 homolog C, vesicle trafficking protein)

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/55999/sec22c-(sec22-homolog-c-vesicle-trafficking-protein)

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