SEC22A (SEC22 homolog A, vesicle trafficking protein)

2016-10-01  

Identity

HGNC
SEC22A
LOCATION
3q21.1
LOCUSID
26984
ALIAS
SEC22L2

Other Information

Locus ID:

NCBI: 26984
MIM: 612442
HGNC: 20260
Ensembl: ENSG00000121542

Variants:

dbSNP: 26984
ClinVar: 26984
TCGA: ENSG00000121542
COSMIC: SEC22A

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000121542ENST00000309934Q96IW7
ENSG00000121542ENST00000466519C9JZ27
ENSG00000121542ENST00000466950F8WAU7
ENSG00000121542ENST00000473494C9JNZ0
ENSG00000121542ENST00000480631C9JDJ8
ENSG00000121542ENST00000481965C9JR77
ENSG00000121542ENST00000487572C9JRY4
ENSG00000121542ENST00000491366C9J463
ENSG00000121542ENST00000492595Q96IW7

Expression (GTEx)

0
5
10
15
20
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Metabolism of proteinsREACTOMER-HSA-392499
Post-translational protein modificationREACTOMER-HSA-597592
Asparagine N-linked glycosylationREACTOMER-HSA-446203
Transport to the Golgi and subsequent modificationREACTOMER-HSA-948021
ER to Golgi Anterograde TransportREACTOMER-HSA-199977
COPII (Coat Protein 2) Mediated Vesicle TransportREACTOMER-HSA-204005
Vesicle-mediated transportREACTOMER-HSA-5653656
Membrane TraffickingREACTOMER-HSA-199991

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
174990462007The transport signal on Sec22 for packaging into COPII-coated vesicles is a conformational epitope.83
174990462007The transport signal on Sec22 for packaging into COPII-coated vesicles is a conformational epitope.83

Citation

Dessen P

SEC22A (SEC22 homolog A, vesicle trafficking protein)

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/56252/sec22a-(sec22-homolog-a-vesicle-trafficking-protein)