POMGNT1 (protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-))

2016-10-01  

Identity

HGNC
LOCATION
1p34.1
LOCUSID
ALIAS
GNTI.2,GnT
FUSION GENES

Other Information

Locus ID:

NCBI: 55624
MIM: 606822
HGNC: 19139
Ensembl: ENSG00000085998

Variants:

dbSNP: 55624
ClinVar: 55624
TCGA: ENSG00000085998
COSMIC: POMGNT1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000085998ENST00000371984Q8WZA1
ENSG00000085998ENST00000371992Q8WZA1
ENSG00000085998ENST00000396420Q68CV6

Expression (GTEx)

0
10
20
30
40
50
60
70

Pathways

PathwaySourceExternal ID
Metabolic pathwaysKEGGhsa01100
Metabolism of proteinsREACTOMER-HSA-392499
Post-translational protein modificationREACTOMER-HSA-597592
O-linked glycosylationREACTOMER-HSA-5173105
Mannose type O-glycan biosynthesisKEGGko00515
Mannose type O-glycan biosynthesisKEGGhsa00515

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
358435862022Compound variants of FKTN, POMGNT1, and LAMB1 gene identified by prenatal whole-exome sequencing in three fetuses with congenital hydrocephalus.0
358435862022Compound variants of FKTN, POMGNT1, and LAMB1 gene identified by prenatal whole-exome sequencing in three fetuses with congenital hydrocephalus.0
331753372021Identification of a novel missense c.386G > A variant in a boy with the POMGNT1-related muscular dystrophy-dystroglycanopathy.5
336105542021Glycosyltransferase POMGNT1 deficiency strengthens N-cadherin-mediated cell-cell adhesion.4
331753372021Identification of a novel missense c.386G > A variant in a boy with the POMGNT1-related muscular dystrophy-dystroglycanopathy.5
336105542021Glycosyltransferase POMGNT1 deficiency strengthens N-cadherin-mediated cell-cell adhesion.4
323063602020FAM3B/PANDER-Like Carbohydrate-Binding Domain in a Glycosyltransferase, POMGNT1.2
323063602020FAM3B/PANDER-Like Carbohydrate-Binding Domain in a Glycosyltransferase, POMGNT1.2
295555142018Congenital muscular dystrophy-dystroglycanopathy, type A, featuring bilateral retinal dysplasia and vertical angle kappa.0
295555142018Congenital muscular dystrophy-dystroglycanopathy, type A, featuring bilateral retinal dysplasia and vertical angle kappa.0
287655682017Novel copy number variation of POMGNT1 associated with muscle-eye-brain disease detected by next-generation sequencing.9
290486552017PomGnT1 enhances temozolomide resistance by activating epithelial-mesenchymal transition signaling in glioblastoma.9
287655682017Novel copy number variation of POMGNT1 associated with muscle-eye-brain disease detected by next-generation sequencing.9
290486552017PomGnT1 enhances temozolomide resistance by activating epithelial-mesenchymal transition signaling in glioblastoma.9
267830772016Generalization of Rare Variant Association Tests for Longitudinal Family Studies.4

Citation

Dessen P

POMGNT1 (protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-))

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/56373/chromosome-explorer/gene-explorer/