SPATA12 (spermatogenesis associated 12)

2016-10-01  

Identity

HGNC
SPATA12
LOCATION
3p14.3
LOCUSID
353324
ALIAS
SRG5
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 353324
MIM: 609869
HGNC: 23221
Ensembl: ENSG00000186451

Variants:

dbSNP: 353324
ClinVar: 353324
TCGA: ENSG00000186451
COSMIC: SPATA12

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000186451ENST00000334325Q7Z6I5
ENSG00000186451ENST00000334325A0A140VJV7

Expression (GTEx)

0
10
20
30
40
50
60
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
242051572013SPATA12 and its possible role in DNA damage induced by ultraviolet-C.4
242051572013SPATA12 and its possible role in DNA damage induced by ultraviolet-C.4
229815412012Transcriptional regulation of human novel gene SPATA12 promoter by AP-1 and HSF.3
229815412012Transcriptional regulation of human novel gene SPATA12 promoter by AP-1 and HSF.3
172515972007Expression and possible functions of a novel gene SPATA12 in human testis.5
172515972007Expression and possible functions of a novel gene SPATA12 in human testis.5
156037062004Identification and expression of a novel human testis-specific gene by digital differential display.0
156037062004Identification and expression of a novel human testis-specific gene by digital differential display.0

Citation

Dessen P

SPATA12 (spermatogenesis associated 12)

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/56465/spata12-(spermatogenesis-associated-12)