STX10 (syntaxin 10)

2016-10-01  

Identity

HGNC
STX10
LOCATION
19p13.13
LOCUSID
8677
ALIAS
SYN10,hsyn10

Other Information

Locus ID:

NCBI: 8677
MIM: 603765
HGNC: 11428
Ensembl: ENSG00000104915

Variants:

dbSNP: 8677
ClinVar: 8677
TCGA: ENSG00000104915
COSMIC: STX10

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000104915ENST00000242770X6R2W0
ENSG00000104915ENST00000343587O60499
ENSG00000104915ENST00000440593F6RTM7
ENSG00000104915ENST00000587230O60499
ENSG00000104915ENST00000587318K7EIY4
ENSG00000104915ENST00000588848K7EPP9
ENSG00000104915ENST00000589083Q5U8S2
ENSG00000104915ENST00000591197K7EJ05
ENSG00000104915ENST00000591415K7EQ84
ENSG00000104915ENST00000591843K7EK75
ENSG00000104915ENST00000593126K7ELY2

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
SNARE interactions in vesicular transportKEGGko04130
SNARE interactions in vesicular transportKEGGhsa04130
Vesicle-mediated transportREACTOMER-HSA-5653656
Membrane TraffickingREACTOMER-HSA-199991
Intra-Golgi and retrograde Golgi-to-ER trafficREACTOMER-HSA-6811442
Retrograde transport at the Trans-Golgi-NetworkREACTOMER-HSA-6811440

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
264422212015The trans-Golgi SNARE syntaxin 10 is required for optimal development of Chlamydia trachomatis.14
264422212015The trans-Golgi SNARE syntaxin 10 is required for optimal development of Chlamydia trachomatis.14
161549032005Trans-Golgi network syntaxin 10 functions distinctly from syntaxins 6 and 16.21
161549032005Trans-Golgi network syntaxin 10 functions distinctly from syntaxins 6 and 16.21

Citation

Dessen P

STX10 (syntaxin 10)

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/56499/stx10-(syntaxin-10)