SDF2 (stromal cell derived factor 2)

2017-08-01  

Identity

HGNC
SDF2
LOCATION
17q11.2
LOCUSID
6388
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 6388
MIM: 602934
HGNC: 10675
Ensembl: ENSG00000132581

Variants:

dbSNP: 6388
ClinVar: 6388
TCGA: ENSG00000132581
COSMIC: SDF2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000132581ENST00000247020Q99470
ENSG00000132581ENST00000247020Q6IBU4
ENSG00000132581ENST00000587788K7ELH6
ENSG00000132581ENST00000591903K7ELI9

Expression (GTEx)

0
5
10
15
20
25
30
35
40
45
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

References

Pubmed IDYearTitleCitations
285975442017Endoplasmic reticulum proteins SDF2 and SDF2L1 act as components of the BiP chaperone cycle to prevent protein aggregation.9
262860232015Stromal cell-derived factor 2 is critical for Hsp90-dependent eNOS activation.8
195135692009Transcript analyses of stromal cell derived factors (SDFs): SDF-2, SDF-4 and SDF-5 reveal a different pattern of expression and prognostic association in human breast cancer.6
194792372009Phenotype-genotype interactions on renal function in type 2 diabetes: an analysis using structural equation modelling.3
271579132016Protection of stromal cell-derived factor 2 by heat shock protein 72 prevents oxaliplatin-induced cell death in oxaliplatin-resistant human gastric cancer cells.3
273350752016Stromal Cell-Derived Factor 2: A Novel Protein that Interferes in Endoplasmic Reticulum Stress Pathway in Human Placental Cells.3

Citation

Dessen P

SDF2 (stromal cell derived factor 2)

Atlas Genet Cytogenet Oncol Haematol. 2017-08-01

Online version: http://atlasgeneticsoncology.org/gene/56949/sdf2-(stromal-cell-derived-factor-2)