GTF2IRD1 (GTF2I repeat domain containing 1)

2017-10-01  

Identity

HGNC
LOCATION
7q11.23
LOCUSID
ALIAS
BEN,CREAM1,GTF3,MUSTRD1,RBAP2,WBS,WBSCR11,WBSCR12,hMusTRD1alpha1
FUSION GENES

Other Information

Locus ID:

NCBI: 9569
MIM: 604318
HGNC: 4661
Ensembl: ENSG00000006704

Variants:

dbSNP: 9569
ClinVar: 9569
TCGA: ENSG00000006704
COSMIC: GTF2IRD1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000006704ENST00000265755Q9UHL9
ENSG00000006704ENST00000424337Q9UHL9
ENSG00000006704ENST00000455841Q9UHL9
ENSG00000006704ENST00000470715H7C4Q8
ENSG00000006704ENST00000476977E9PFE2

Expression (GTEx)

0
5
10
15
20
25
30
35
40

Pathways

PathwaySourceExternal ID
Basal transcription factorsKEGGko03022
Basal transcription factorsKEGGhsa03022
Herpes simplex infectionKEGGko05168
Herpes simplex infectionKEGGhsa05168
cGMP-PKG signaling pathwayKEGGhsa04022
cGMP-PKG signaling pathwayKEGGko04022

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
317586082020GTF2IRD1 on chromosome 7 is a novel oncogene regulating the tumor-suppressor gene TGFβR2 in colorectal cancer.13
329362322020GTF2IRD1 overexpression promotes tumor progression and correlates with less CD8+ T cells infiltration in pancreatic cancer.6
317586082020GTF2IRD1 on chromosome 7 is a novel oncogene regulating the tumor-suppressor gene TGFβR2 in colorectal cancer.13
329362322020GTF2IRD1 overexpression promotes tumor progression and correlates with less CD8+ T cells infiltration in pancreatic cancer.6
298848452018Williams Syndrome neuroanatomical score associates with GTF2IRD1 in large-scale magnetic resonance imaging cohorts: a proof of concept for multivariate endophenotypes.4
298848452018Williams Syndrome neuroanatomical score associates with GTF2IRD1 in large-scale magnetic resonance imaging cohorts: a proof of concept for multivariate endophenotypes.4
272390382016An In Vivo Gain-of-Function Screen Identifies the Williams-Beuren Syndrome Gene GTF2IRD1 as a Mammary Tumor Promoter.7
272390382016An In Vivo Gain-of-Function Screen Identifies the Williams-Beuren Syndrome Gene GTF2IRD1 as a Mammary Tumor Promoter.7
262753502015The nuclear localization pattern and interaction partners of GTF2IRD1 demonstrate a role in chromatin regulation.11
263203622015Association of GTF2I and GTF2IRD1 polymorphisms with systemic lupus erythematosus in a Chinese Han population.6
262753502015The nuclear localization pattern and interaction partners of GTF2IRD1 demonstrate a role in chromatin regulation.11
263203622015Association of GTF2I and GTF2IRD1 polymorphisms with systemic lupus erythematosus in a Chinese Han population.6
221985722012Mutation of Gtf2ird1 from the Williams-Beuren syndrome critical region results in facial dysplasia, motor dysfunction, and altered vocalisations.17
226087122012The contribution of CLIP2 haploinsufficiency to the clinical manifestations of the Williams-Beuren syndrome.16
231451422012SUMOylation of GTF2IRD1 regulates protein partner interactions and ubiquitin-mediated degradation.5

Citation

Dessen P

GTF2IRD1 (GTF2I repeat domain containing 1)

Atlas Genet Cytogenet Oncol Haematol. 2017-10-01

Online version: http://atlasgeneticsoncology.org/gene/57090/gtf2ird1-(gtf2i-repeat-domain-containing-1)