RTRAF (RNA transcription, translation and transport factor)

2017-10-01  

Identity

HGNC
LOCATION
14q22.1
LOCUSID
ALIAS
C14orf166,CGI-99,CGI99,CLE,CLE7,LCRP369,RLLM1,hCLE,hCLE1

Other Information

Locus ID:

NCBI: 51637
MIM: 610858
HGNC: 23169
Ensembl: ENSG00000087302

Variants:

dbSNP: 51637
ClinVar: 51637
TCGA: ENSG00000087302
COSMIC: RTRAF

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000087302ENST00000261700Q9Y224
ENSG00000087302ENST00000261700Q549M8
ENSG00000087302ENST00000553362H0YJB9
ENSG00000087302ENST00000556760G3V4C6
ENSG00000087302ENST00000557553G3V4E7

Pathways

PathwaySourceExternal ID
Gene ExpressionREACTOMER-HSA-74160
tRNA processingREACTOMER-HSA-72306
tRNA processing in the nucleusREACTOMER-HSA-6784531

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
372653722023An in silico prediction of interaction models of influenza A virus PA and human C14orf166 protein from yeast-two-hybrid screening data.0
372653722023An in silico prediction of interaction models of influenza A virus PA and human C14orf166 protein from yeast-two-hybrid screening data.0
348543792021Molecular architecture of the human tRNA ligase complex.15
348543792021Molecular architecture of the human tRNA ligase complex.15
280404362017FAM98A associates with DDX1-C14orf166-FAM98B in a novel complex involved in colorectal cancer progression.14
280404362017FAM98A associates with DDX1-C14orf166-FAM98B in a novel complex involved in colorectal cancer progression.14
262198952016C14ORF166 overexpression is associated with pelvic lymph node metastasis and poor prognosis in uterine cervical cancer.10
268649022016hCLE/C14orf166, a cellular protein required for viral replication, is incorporated into influenza virus particles.5
268830172016C14orf166 overexpression correlates with tumor progression and poor prognosis of breast cancer.1
269058792016C14orf166 is a high-risk biomarker for bladder cancer and promotes bladder cancer cell proliferation.5
262198952016C14ORF166 overexpression is associated with pelvic lymph node metastasis and poor prognosis in uterine cervical cancer.10
268649022016hCLE/C14orf166, a cellular protein required for viral replication, is incorporated into influenza virus particles.5
268830172016C14orf166 overexpression correlates with tumor progression and poor prognosis of breast cancer.1
269058792016C14orf166 is a high-risk biomarker for bladder cancer and promotes bladder cancer cell proliferation.5
259640932015Overexpression of chromosome 14 open reading frame 166 correlates with disease progression and poorer prognosis in human NPC.3

Citation

Dessen P

RTRAF (RNA transcription, translation and transport factor)

Atlas Genet Cytogenet Oncol Haematol. 2017-10-01

Online version: http://atlasgeneticsoncology.org/gene/57165/rtraf-(rna-transcription-translation-and-transport-factor)