SNHG6 (small nucleolar RNA host gene 6)

2017-10-01  

Identity

HGNC
SNHG6
LOCATION
8q13.1
LOCUSID
641638
ALIAS
HBII-276HG,NCRNA00058,U87HG
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 641638
MIM: 612215
HGNC: 32965
Ensembl: ENSG00000245910

Variants:

dbSNP: 641638
ClinVar: 641638
TCGA: ENSG00000245910
COSMIC: SNHG6

RNA/Proteins

Expression (GTEx)

0
50
100
150
200
250
300
350
400
450
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

References

Pubmed IDYearTitleCitations
275303522017The long non-coding RNA, SNHG6-003, functions as a competing endogenous RNA to promote the progression of hepatocellular carcinoma.51
277026622016Upregulation of SNHG6 regulates ZEB1 expression by competitively binding miR-101-3p and interacting with UPF1 in hepatocellular carcinoma.39
286834462017LncRNA SNHG6 is Associated with Poor Prognosis of Gastric Cancer and Promotes Cell Proliferation and EMT through Epigenetically Silencing p27 and Sponging miR-101-3p.38
300310622018Long noncoding RNA SNHG6 regulates p21 expression via activation of the JNK pathway and regulation of EZH2 in gastric cancer cells.15
295797052018LncRNA SNHG6 acts as a prognostic factor to regulate cell proliferation in glioma through targeting p21.9
313222512019LncRNA SNHG6 inhibits cell proliferation and metastasis by targeting ETS1 via the PI3K/AKT/mTOR pathway in colorectal cancer.7
285083292018Long Non-Coding RNA SNHG6 as a Potential Biomarker for Hepatocellular Carcinoma.0
295068782018Up-regulated expression of SNHG6 predicts poor prognosis in colorectal cancer.0
297993572018Long non-coding RNA SNHG6 promotes glioma tumorigenesis by sponging miR-101-3p.0
298441272018SNHG6 Acts as a Genome-Wide Hypomethylation Trigger via Coupling of miR-1297-Mediated S-Adenosylmethionine-Dependent Positive Feedback Loops.0

Citation

Dessen P

SNHG6 (small nucleolar RNA host gene 6)

Atlas Genet Cytogenet Oncol Haematol. 2017-10-01

Online version: http://atlasgeneticsoncology.org/gene/57169/snhg6-(small-nucleolar-rna-host-gene-6)