SYMPK (symplekin)

2017-10-01  

Identity

HGNC
LOCATION
19q13.32
LOCUSID
ALIAS
Pta1,SPK,SYM
FUSION GENES

Other Information

Locus ID:

NCBI: 8189
MIM: 602388
HGNC: 22935
Ensembl: ENSG00000125755

Variants:

dbSNP: 8189
ClinVar: 8189
TCGA: ENSG00000125755
COSMIC: SYMPK

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000125755ENST00000245934Q92797
ENSG00000125755ENST00000245934A0A024R0R6
ENSG00000125755ENST00000594293M0R1C2
ENSG00000125755ENST00000596824M0R033
ENSG00000125755ENST00000598059M0R180
ENSG00000125755ENST00000599460A0A087WUE9
ENSG00000125755ENST00000599814A0A087WUE9
ENSG00000125755ENST00000600237M0R3C7
ENSG00000125755ENST00000601600M0R039
ENSG00000125755ENST00000602061M0QXP5

Expression (GTEx)

0
10
20
30
40
50
60
70
80

Pathways

PathwaySourceExternal ID
Tight junctionKEGGko04530
Tight junctionKEGGhsa04530
mRNA surveillance pathwayKEGGko03015
mRNA surveillance pathwayKEGGhsa03015
Gene ExpressionREACTOMER-HSA-74160
RNA Polymerase II TranscriptionREACTOMER-HSA-73857
RNA Polymerase II Transcription TerminationREACTOMER-HSA-73856
Cleavage of Growing Transcript in the Termination RegionREACTOMER-HSA-109688
Processing of Capped Intron-Containing Pre-mRNAREACTOMER-HSA-72203
mRNA SplicingREACTOMER-HSA-72172
mRNA Splicing - Major PathwayREACTOMER-HSA-72163
mRNA 3'-end processingREACTOMER-HSA-72187
Transport of Mature Transcript to CytoplasmREACTOMER-HSA-72202
Transport of Mature mRNAs Derived from Intronless TranscriptsREACTOMER-HSA-159234
Transport of Mature mRNA Derived from an Intronless TranscriptREACTOMER-HSA-159231
Processing of Capped Intronless Pre-mRNAREACTOMER-HSA-75067
Processing of Intronless Pre-mRNAsREACTOMER-HSA-77595

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
291672702018UbiA prenyltransferase domain-containing protein-1 modulates HMG-CoA reductase degradation to coordinate synthesis of sterol and nonsterol isoprenoids.15
300321592018Rab11 Functions as an Oncoprotein via Nuclear Factor kappa B (NF-κB) Signaling Pathway in Human Bladder Carcinoma.4
291672702018UbiA prenyltransferase domain-containing protein-1 modulates HMG-CoA reductase degradation to coordinate synthesis of sterol and nonsterol isoprenoids.15
300321592018Rab11 Functions as an Oncoprotein via Nuclear Factor kappa B (NF-κB) Signaling Pathway in Human Bladder Carcinoma.4
282952832017Novel colon cancer susceptibility variants identified from a genome-wide association study in African Americans.14
286304282017Nuclear accumulation of symplekin promotes cellular proliferation and dedifferentiation in an ERK1/2-dependent manner.2
282952832017Novel colon cancer susceptibility variants identified from a genome-wide association study in African Americans.14
286304282017Nuclear accumulation of symplekin promotes cellular proliferation and dedifferentiation in an ERK1/2-dependent manner.2
259210692015Global Promotion of Alternative Internal Exon Usage by mRNA 3' End Formation Factors.29
259210692015Global Promotion of Alternative Internal Exon Usage by mRNA 3' End Formation Factors.29
239946192013Symplekin, a polyadenylation factor, prevents MOZ and MLL activity on HOXA9 in hematopoietic cells.1
239946192013Symplekin, a polyadenylation factor, prevents MOZ and MLL activity on HOXA9 in hematopoietic cells.1
222187352012Expression and distribution of symplekin regulates the assembly and function of the epithelial tight junction.6
222187352012Expression and distribution of symplekin regulates the assembly and function of the epithelial tight junction.6
201338052010Symplekin promotes tumorigenicity by up-regulating claudin-2 expression.43

Citation

Dessen P

SYMPK (symplekin)

Atlas Genet Cytogenet Oncol Haematol. 2017-10-01

Online version: http://atlasgeneticsoncology.org/gene/57217/sympk-(symplekin)