VPS52 (VPS52 subunit of GARP complex)

2018-07-01  

Identity

HGNC
LOCATION
6p21.32
LOCUSID
ALIAS
ARE1,SAC2,SACM2L,dJ1033B10.5
FUSION GENES

Other Information

Locus ID:

NCBI: 6293
MIM: 603443
HGNC: 10518
Ensembl: ENSG00000223501

Variants:

dbSNP: 6293
ClinVar: 6293
TCGA: ENSG00000223501
COSMIC: VPS52

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000223501ENST00000445902Q8N1B4
ENSG00000223501ENST00000445902Q4VXZ2
ENSG00000223501ENST00000482399E9PI03

Expression (GTEx)

0
10
20
30
40
50
60

Pathways

PathwaySourceExternal ID
Vesicle-mediated transportREACTOMER-HSA-5653656
Membrane TraffickingREACTOMER-HSA-199991
Intra-Golgi and retrograde Golgi-to-ER trafficREACTOMER-HSA-6811442
Retrograde transport at the Trans-Golgi-NetworkREACTOMER-HSA-6811440

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
315339532019The PI(4)P phosphatase Sac2 controls insulin granule docking and release.11
315339532019The PI(4)P phosphatase Sac2 controls insulin granule docking and release.11
278896392017Sulforaphane is a Nrf2-independent inhibitor of mitochondrial fission.30
287914382017VPS52 induces apoptosis via cathepsin D in gastric cancer.9
278896392017Sulforaphane is a Nrf2-independent inhibitor of mitochondrial fission.30
287914382017VPS52 induces apoptosis via cathepsin D in gastric cancer.9
252694722014p62/SQSTM1 is involved in cisplatin resistance in human ovarian cancer cells via the Keap1-Nrf2-ARE system.44
252694722014p62/SQSTM1 is involved in cisplatin resistance in human ovarian cancer cells via the Keap1-Nrf2-ARE system.44
196202882009Dual roles of the mammalian GARP complex in tethering and SNARE complex assembly at the trans-golgi network.71
198514452009High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions.58
196202882009Dual roles of the mammalian GARP complex in tethering and SNARE complex assembly at the trans-golgi network.71
198514452009High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions.58
183675452008Requirement of the human GARP complex for mannose 6-phosphate-receptor-dependent sorting of cathepsin D to lysosomes.77
183675452008Requirement of the human GARP complex for mannose 6-phosphate-receptor-dependent sorting of cathepsin D to lysosomes.77
158783292005Characterization of the human GARP (Golgi associated retrograde protein) complex.55

Citation

Dessen P

VPS52 (VPS52 subunit of GARP complex)

Atlas Genet Cytogenet Oncol Haematol. 2018-07-01

Online version: http://atlasgeneticsoncology.org/gene/57433/vps52-(vps52-subunit-of-garp-complex)