BDNF-AS (BDNF antisense RNA)

2018-11-01  

Identity

HGNC
BDNF-AS
LOCATION
11p14.1
LOCUSID
497258
ALIAS
ANTI-BDNF,BDNF,BDNF-AS1,BDNFAS,BDNFOS,NCRNA00049
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 497258
MIM: 611468
HGNC: 20608
Ensembl: ENSG00000245573

Variants:

dbSNP: 497258
ClinVar: 497258
TCGA: ENSG00000245573
COSMIC: BDNF-AS

RNA/Proteins

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA447216SchizophreniaDiseaseClinicalAnnotationassociatedPD
PA452233antipsychoticsChemicalClinicalAnnotationassociatedPD

References

Pubmed IDYearTitleCitations
286576682018Long noncoding RNA BDNF-AS inversely regulated BDNF and modulated high-glucose induced apoptosis in human retinal pigment epithelial cells.10
307283472019The lncRNA BDNF-AS is an epigenetic regulator in the human amygdala in early onset alcohol use disorders.6
283043622017BDNF Variants May Modulate Long-Term Visual Memory Performance in a Healthy Cohort.3
310623822019LncRNA BDNF-AS suppresses colorectal cancer cell proliferation and migration by epigenetically repressing GSK-3β expression.3
301436952018Associations between Variants in BDNF/BDNFOS Gene and Lumbar Disc Herniation Risk among Han Chinese People.2
297105282018Long noncoding RNA BDNF-AS is associated with clinical outcomes and has functional role in human prostate cancer.0
303528342018LncRNA BDNF-AS is associated with the malignant status and regulates cell proliferation and apoptosis in osteosarcoma.0

Citation

Dessen P

BDNF-AS (BDNF antisense RNA)

Atlas Genet Cytogenet Oncol Haematol. 2018-11-01

Online version: http://atlasgeneticsoncology.org/gene/57661/bdnf-as-(bdnf-antisense-rna)