EXOSC4 (exosome component 4)

2019-05-01  

Identity

HGNC
LOCATION
8q24.3
LOCUSID
ALIAS
RRP41,RRP41A,Rrp41p,SKI6,Ski6p,hRrp41p,p12A

Other Information

Locus ID:

NCBI: 54512
MIM: 606491
HGNC: 18189
Ensembl: ENSG00000178896

Variants:

dbSNP: 54512
ClinVar: 54512
TCGA: ENSG00000178896
COSMIC: EXOSC4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000178896ENST00000316052Q9NPD3
ENSG00000178896ENST00000525936E9PPI9
ENSG00000178896ENST00000527954E9PI41

Expression (GTEx)

0
50
100
150
200

Pathways

PathwaySourceExternal ID
RNA degradationKEGGko03018
RNA degradationKEGGhsa03018
Exosome, archaeaKEGGhsa_M00390
Exosome, eukaryotesKEGGhsa_M00391
Exosome, archaeaKEGGM00390
Exosome, eukaryotesKEGGM00391
Metabolism of proteinsREACTOMER-HSA-392499
Unfolded Protein Response (UPR)REACTOMER-HSA-381119
PERK regulates gene expressionREACTOMER-HSA-381042
ATF4 activates genesREACTOMER-HSA-380994
Gene ExpressionREACTOMER-HSA-74160
Deadenylation-dependent mRNA decayREACTOMER-HSA-429914
mRNA decay by 3' to 5' exoribonucleaseREACTOMER-HSA-429958
Regulation of mRNA stability by proteins that bind AU-rich elementsREACTOMER-HSA-450531
Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNAREACTOMER-HSA-450385
Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNAREACTOMER-HSA-450513
KSRP (KHSRP) binds and destabilizes mRNAREACTOMER-HSA-450604
rRNA processingREACTOMER-HSA-72312
Major pathway of rRNA processing in the nucleolus and cytosolREACTOMER-HSA-6791226
rRNA processing in the nucleus and cytosolREACTOMER-HSA-8868773

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
389132812024RUNX3 exerts tumor-suppressive role through inhibiting EXOSC4 expression.0
389132812024RUNX3 exerts tumor-suppressive role through inhibiting EXOSC4 expression.0
350089222022RNA Exosome Component EXOSC4 Amplified in Multiple Cancer Types Is Required for the Cancer Cell Survival.4
350089222022RNA Exosome Component EXOSC4 Amplified in Multiple Cancer Types Is Required for the Cancer Cell Survival.4
301559362018EXOSC4 functions as a potential oncogene in development and progression of colorectal cancer.8
301559362018EXOSC4 functions as a potential oncogene in development and progression of colorectal cancer.8
175455632007Human cell growth requires a functional cytoplasmic exosome, which is involved in various mRNA decay pathways.48
175455632007Human cell growth requires a functional cytoplasmic exosome, which is involved in various mRNA decay pathways.48
124192562002Protein-protein interactions between human exosome components support the assembly of RNase PH-type subunits into a six-membered PNPase-like ring.28
124192562002Protein-protein interactions between human exosome components support the assembly of RNase PH-type subunits into a six-membered PNPase-like ring.28

Citation

Dessen P

EXOSC4 (exosome component 4)

Atlas Genet Cytogenet Oncol Haematol. 2019-05-01

Online version: http://atlasgeneticsoncology.org/gene/58020/exosc4-(exosome-component-4)