TRIM50 (tripartite motif containing 50)

2021-06-01  

Identity

HGNC
LOCATION
7q11.23
LOCUSID
ALIAS
TRIM50A

Other Information

Locus ID:

NCBI: 135892
MIM: 612548
HGNC: 19017
Ensembl: ENSG00000146755

Variants:

dbSNP: 135892
ClinVar: 135892
TCGA: ENSG00000146755
COSMIC: TRIM50

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000146755ENST00000333149Q86XT4
ENSG00000146755ENST00000333149Q2M204
ENSG00000146755ENST00000453152Q86XT4
ENSG00000146755ENST00000453152Q2M204

Expression (GTEx)

0
10
20
30
40
50
60

Pathways

PathwaySourceExternal ID
Immune SystemREACTOMER-HSA-168256
Adaptive Immune SystemREACTOMER-HSA-1280218
Class I MHC mediated antigen processing & presentationREACTOMER-HSA-983169
Antigen processing: Ubiquitination & Proteasome degradationREACTOMER-HSA-983168

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
374099712023TRIM50 Inhibits Gastric Cancer Progression by Regulating the Ubiquitination and Nuclear Translocation of JUP.2
374099712023TRIM50 Inhibits Gastric Cancer Progression by Regulating the Ubiquitination and Nuclear Translocation of JUP.2
296043082018TRIM50 regulates Beclin 1 proautophagic activity.27
297895832018TRIM50 suppressed hepatocarcinoma progression through directly targeting SNAIL for ubiquitous degradation.24
296043082018TRIM50 regulates Beclin 1 proautophagic activity.27
297895832018TRIM50 suppressed hepatocarcinoma progression through directly targeting SNAIL for ubiquitous degradation.24
243089622014HDAC6 mediates the acetylation of TRIM50.10
243089622014HDAC6 mediates the acetylation of TRIM50.10
227923222012The E3-ubiquitin ligase TRIM50 interacts with HDAC6 and p62, and promotes the sequestration and clearance of ubiquitinated proteins into the aggresome.34
227923222012The E3-ubiquitin ligase TRIM50 interacts with HDAC6 and p62, and promotes the sequestration and clearance of ubiquitinated proteins into the aggresome.34
183984352008Williams-Beuren syndrome TRIM50 encodes an E3 ubiquitin ligase.26
183984352008Williams-Beuren syndrome TRIM50 encodes an E3 ubiquitin ligase.26

Citation

Dessen P

TRIM50 (tripartite motif containing 50)

Atlas Genet Cytogenet Oncol Haematol. 2021-06-01

Online version: http://atlasgeneticsoncology.org/gene/58338/trim50-(tripartite-motif-containing-50)