ACSM4 (acyl-CoA synthetase medium chain family member 4)

2014-11-01 Affiliation

Identity

HGNC

ACSM4

LOCATION

12p13.31

LOCUSID

341392

ALIAS

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 341392
MIM: 614360
HGNC: 32016
Ensembl: ENSG00000215009

Variants:

dbSNP: 341392
ClinVar: 341392
TCGA: ENSG00000215009
COSMIC: ACSM4

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000215009	ENST00000399422	P0C7M7

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Butanoate metabolism	KEGG	ko00650
Butanoate metabolism	KEGG	hsa00650
Metabolic pathways	KEGG	hsa01100
Metabolism	REACTOME	R-HSA-1430728
Biological oxidations	REACTOME	R-HSA-211859
Phase II conjugation	REACTOME	R-HSA-156580
Amino Acid conjugation	REACTOME	R-HSA-156587
Conjugation of carboxylic acids	REACTOME	R-HSA-159424
Conjugation of salicylate with glycine	REACTOME	R-HSA-177128

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
23982661	2014	ACSM4 polymorphisms are associated with rapid AIDS progression in HIV-infected patients.	3
23982661	2014	ACSM4 polymorphisms are associated with rapid AIDS progression in HIV-infected patients.	3
20877624	2010	Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.	20
20877624	2010	Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.	20

Citation

Dessen P

ACSM4 (acyl-CoA synthetase medium chain family member 4)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/60105/acsm4-(acyl-coa-synthetase-medium-chain-family-member-4)