AP3S2 (adaptor related protein complex 3 subunit sigma 2)

2014-11-01  

Identity

HGNC
AP3S2
LOCATION
15q26.1
LOCUSID
10239
ALIAS
AP3S3,sigma3b
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 10239
MIM: 602416
HGNC: 571
Ensembl: ENSG00000157823

Variants:

dbSNP: 10239
ClinVar: 10239
TCGA: ENSG00000157823
COSMIC: AP3S2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000157823ENST00000336418P59780
ENSG00000157823ENST00000336418A0A024RC62
ENSG00000157823ENST00000423566P59780
ENSG00000157823ENST00000557999H0YKM3
ENSG00000157823ENST00000558011H0YLI7
ENSG00000157823ENST00000558806H0YNI6
ENSG00000157823ENST00000558999H0YLX6
ENSG00000157823ENST00000560251P59780
ENSG00000157823ENST00000560940H0YN38
ENSG00000157823ENST00000617003A0A087WY05

Expression (GTEx)

0
5
10
15
20
25
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
LysosomeKEGGko04142
LysosomeKEGGhsa04142

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
209664102010Genomewide linkage and peakwide association analyses of carotid plaque in Caribbean Hispanics.18
209664102010Genomewide linkage and peakwide association analyses of carotid plaque in Caribbean Hispanics.18

Citation

Dessen P

AP3S2 (adaptor related protein complex 3 subunit sigma 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/60406/ap3s2-(adaptor-related-protein-complex-3-subunit-sigma-2)