C2orf42 (chromosome 2 open reading frame 42)

2014-11-01  

Identity

HGNC
C2orf42
LOCATION
2p13.3
LOCUSID
54980
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 54980
HGNC: 26056
Ensembl: ENSG00000115998

Variants:

dbSNP: 54980
ClinVar: 54980
TCGA: ENSG00000115998
COSMIC: C2orf42

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000115998ENST00000264434Q9NWW7
ENSG00000115998ENST00000417203C9JV10
ENSG00000115998ENST00000417865C9JZF3
ENSG00000115998ENST00000419381C9JKD5
ENSG00000115998ENST00000420306Q9NWW7
ENSG00000115998ENST00000425268C9JK51
ENSG00000115998ENST00000428010C9JS43
ENSG00000115998ENST00000428751C9J5U1
ENSG00000115998ENST00000447804C9JJF4
ENSG00000115998ENST00000457952C9J4L7

Expression (GTEx)

0
10
20
30
40
50
60
70
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

C2orf42 (chromosome 2 open reading frame 42)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61152/c2orf42-(chromosome-2-open-reading-frame-42)