C3orf18 (chromosome 3 open reading frame 18)

2014-11-01  

Identity

HGNC
C3orf18
LOCATION
3p21.31
LOCUSID
51161
ALIAS
G20

Other Information

Locus ID:

NCBI: 51161
HGNC: 24837
Ensembl: ENSG00000088543

Variants:

dbSNP: 51161
ClinVar: 51161
TCGA: ENSG00000088543
COSMIC: C3orf18

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000088543ENST00000357203Q9UK00
ENSG00000088543ENST00000422619C9IYC4
ENSG00000088543ENST00000426034Q9UK00
ENSG00000088543ENST00000430746F8WCC4
ENSG00000088543ENST00000441239Q9UK00
ENSG00000088543ENST00000449241Q9UK00

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
202055912010Host determinants of HIV-1 control in African Americans.91
202055912010Host determinants of HIV-1 control in African Americans.91

Citation

Dessen P

C3orf18 (chromosome 3 open reading frame 18)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61177/c3orf18-(chromosome-3-open-reading-frame-18)