CALHM3 (calcium homeostasis modulator 3)

2014-11-01  

Identity

HGNC
CALHM3
LOCATION
10q24.33
LOCUSID
119395
ALIAS
FAM26A,bA225H22.7

Other Information

Locus ID:

NCBI: 119395
MIM: 618263
HGNC: 23458
Ensembl: ENSG00000183128

Variants:

dbSNP: 119395
ClinVar: 119395
TCGA: ENSG00000183128
COSMIC: CALHM3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000183128ENST00000369783Q86XJ0

Expression (GTEx)

0
1
2
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
163854512006A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease.69
201645732010Genetic association between CALHM1, 2, and 3 polymorphisms and Alzheimer's disease in a Japanese population.3
201645732010Genetic association between CALHM1, 2, and 3 polymorphisms and Alzheimer's disease in a Japanese population.3

Citation

Dessen P

CALHM3 (calcium homeostasis modulator 3)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61389/calhm3-(calcium-homeostasis-modulator-3)